Variant report

Variant	rs4813232
Chromosome Location	chr20:16603714-16603715
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs4813230	0.93[ASN][1000 genomes]
rs4813231	0.81[CHB][hapmap];0.89[JPT][hapmap];0.87[ASN][1000 genomes]
rs4814518	0.81[ASN][1000 genomes]
rs6034555	0.83[ASN][1000 genomes]
rs6044174	0.93[ASN][1000 genomes]
rs6044175	0.83[ASN][1000 genomes]
rs6080303	0.82[JPT][hapmap]
rs6080332	0.86[CHB][hapmap];0.84[ASN][1000 genomes]
rs6080333	0.85[CHB][hapmap];0.85[JPT][hapmap];0.86[YRI][hapmap];0.83[ASN][1000 genomes]
rs6080334	0.85[CHB][hapmap];0.89[JPT][hapmap];0.81[YRI][hapmap];0.83[ASN][1000 genomes]
rs6080338	0.85[CHB][hapmap];0.83[JPT][hapmap];0.86[YRI][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:16598400-16605600	Weak transcription	Fetal Lung	lung
2	chr20:16603200-16603800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr20:16603200-16603800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr20:16603400-16607000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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