Variant report

Variant	rs4826191
Chromosome Location	chrX:80018753-80018754
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17281706	1.00[ASW][hapmap]
rs17281713	1.00[ASW][hapmap]
rs4826025	1.00[ASW][hapmap]
rs4826027	1.00[ASW][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916218	chrX:79377399-80230929	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv33127	chrX:79989618-80370141	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:79954800-80022200	Weak transcription	Fetal Intestine Small	intestine
2	chrX:79960200-80020600	Weak transcription	Hela-S3	cervix
3	chrX:79965600-80034200	Weak transcription	Left Ventricle	heart
4	chrX:79979600-80022400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chrX:79990800-80021800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chrX:79991000-80019800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chrX:79999800-80020600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chrX:79999800-80032000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chrX:80000400-80045800	Weak transcription	Dnd41	blood
10	chrX:80006000-80022200	Weak transcription	Primary T cells fromperipheralblood	blood
11	chrX:80006400-80030200	Weak transcription	Primary B cells from cord blood	blood
12	chrX:80006600-80021600	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chrX:80014400-80020600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chrX:80017800-80047200	Weak transcription	Primary B cells from peripheral blood	blood
15	chrX:80018000-80022800	Weak transcription	Small Intestine	intestine
16	chrX:80018200-80018800	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chrX:80018200-80020600	Weak transcription	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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