Variant report

Variant rs484172
Chromosome Location chr10:27528553-27528554
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27475600-27528600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr10:27476200-27528600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr10:27488600-27528600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr10:27508600-27529000 Weak transcription Placenta Amnion Placenta Amnion
5 chr10:27508800-27528600 Weak transcription H9 Cell Line embryonic stem cell
6 chr10:27508800-27528600 Weak transcription Esophagus oesophagus
7 chr10:27508800-27528600 Weak transcription Thymus Thymus
8 chr10:27508800-27528600 Weak transcription HSMMtube muscle
9 chr10:27508800-27528800 Weak transcription Aorta Aorta
10 chr10:27508800-27529000 Weak transcription Small Intestine intestine
11 chr10:27516600-27528600 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr10:27519800-27528600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr10:27519800-27528600 Weak transcription Gastric stomach
14 chr10:27520400-27528600 Weak transcription Brain Cingulate Gyrus brain
15 chr10:27520600-27528600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr10:27520600-27528600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr10:27520800-27528600 Weak transcription Brain Anterior Caudate brain
18 chr10:27520800-27528600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr10:27520800-27528600 Weak transcription Placenta Placenta
20 chr10:27520800-27528600 Weak transcription HSMM muscle
21 chr10:27522600-27528600 Weak transcription Fetal Thymus thymus
22 chr10:27524000-27528600 Weak transcription Fetal Muscle Leg muscle
23 chr10:27525000-27528800 Weak transcription Ovary ovary
24 chr10:27525000-27529000 Weak transcription Stomach Mucosa stomach
25 chr10:27525600-27528600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr10:27526400-27530000 Active TSS A549 lung
27 chr10:27527200-27528600 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr10:27527200-27528600 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr10:27527200-27528600 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr10:27527200-27528600 Weak transcription Lung lung
31 chr10:27527400-27528600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr10:27527600-27528600 Enhancers Fetal Heart heart
33 chr10:27527800-27528600 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr10:27527800-27528600 Enhancers Primary monocytes fromperipheralblood blood
35 chr10:27527800-27528600 Enhancers Primary neutrophils fromperipheralblood blood
36 chr10:27527800-27528600 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr10:27527800-27528600 Enhancers Fetal Lung lung
38 chr10:27527800-27528600 Enhancers Pancreas Pancrea
39 chr10:27527800-27529400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr10:27527800-27530000 Active TSS GM12878-XiMat blood
41 chr10:27527800-27530200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
42 chr10:27527800-27532200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
43 chr10:27528000-27528600 Enhancers Primary B cells from peripheral blood blood
44 chr10:27528000-27528600 Active TSS Primary mononuclear cells fromperipheralblood Blood
45 chr10:27528000-27528600 Weak transcription Psoas Muscle Psoas
46 chr10:27528000-27529000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr10:27528000-27529200 Flanking Active TSS Adipose Nuclei Adipose
48 chr10:27528000-27529800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
49 chr10:27528000-27530000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
50 chr10:27528000-27530000 Active TSS Colonic Mucosa Colon

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