Variant report

Variant rs4844821
Chromosome Location chr1:209562566-209562567
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209553200-209568600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:209555600-209564400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:209555800-209565200 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:209557800-209565200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:209558000-209566200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:209558200-209564400 Enhancers HMEC breast
7 chr1:209558400-209564400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:209559400-209565200 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:209559400-209566000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:209560000-209563000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:209560400-209563600 Enhancers HSMM muscle
12 chr1:209560600-209562600 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr1:209560600-209563600 Enhancers Muscle Satellite Cultured Cells --
14 chr1:209560800-209563000 Enhancers HSMMtube muscle
15 chr1:209560800-209563200 Enhancers Esophagus oesophagus
16 chr1:209560800-209563400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:209560800-209563400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:209560800-209563400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:209560800-209563400 Enhancers Osteobl bone
20 chr1:209560800-209563600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:209560800-209563600 Enhancers NH-A brain
22 chr1:209560800-209563600 Enhancers NHLF lung
23 chr1:209560800-209565000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:209560800-209565600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:209561000-209563400 Enhancers A549 lung
26 chr1:209561000-209565000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr1:209561000-209565400 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:209561000-209571400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr1:209561200-209564200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:209561200-209567400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr1:209561400-209563200 Enhancers NHDF-Ad bronchial
32 chr1:209561600-209562600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr1:209561600-209563000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:209561600-209564400 Enhancers NHEK skin
35 chr1:209562000-209563200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:209562000-209563200 Enhancers Placenta Amnion Placenta Amnion
37 chr1:209562400-209562600 Flanking Active TSS Hela-S3 cervix
38 chr1:209562400-209563000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr1:209562400-209563200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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