Variant report

Variant	rs4848235
Chromosome Location	chr2:124815015-124815016
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10496623	0.84[AFR][1000 genomes]
rs10496625	0.84[AFR][1000 genomes]
rs12614779	0.84[AFR][1000 genomes]
rs12622072	0.85[CEU][hapmap]
rs13425875	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17010743	0.84[AMR][1000 genomes]
rs17010744	0.85[CEU][hapmap];0.84[AMR][1000 genomes]
rs17010780	0.85[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap]
rs17010809	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17010810	1.00[CEU][hapmap]
rs17010817	1.00[CEU][hapmap]
rs17010819	1.00[CEU][hapmap]
rs17010881	0.84[AFR][1000 genomes]
rs4848911	0.85[CEU][hapmap]
rs55718116	0.92[AFR][1000 genomes]
rs7585692	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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