Variant report

Variant	rs17010809
Chromosome Location	chr2:124819540-124819541
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10496623	1.00[ASW][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs10496625	1.00[ASW][hapmap];0.83[CHD][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12614779	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs12622072	1.00[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs13425875	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1371147	1.00[YRI][hapmap]
rs17010743	1.00[GIH][hapmap];0.88[MEX][hapmap];0.83[TSI][hapmap];0.87[AMR][1000 genomes]
rs17010744	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs17010780	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap]
rs17010810	0.87[CEU][hapmap];0.81[CHB][hapmap];1.00[YRI][hapmap]
rs17010817	1.00[ASW][hapmap];0.87[CEU][hapmap];0.81[CHB][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs17010819	0.87[CEU][hapmap];0.81[CHB][hapmap];1.00[YRI][hapmap]
rs17010881	0.83[CHD][hapmap];1.00[LWK][hapmap];0.92[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs17010934	1.00[ASW][hapmap]
rs17010944	1.00[YRI][hapmap]
rs2699381	1.00[ASW][hapmap]
rs4848235	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4848911	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[YRI][hapmap]
rs4848916	1.00[ASW][hapmap]
rs55718116	1.00[AFR][1000 genomes]
rs7585692	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124819400-124819600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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