Variant report

Variant	rs4852848
Chromosome Location	chr2:72311244-72311245
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10183844	0.92[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10195125	0.96[ASN][1000 genomes]
rs1400682	0.87[ASN][1000 genomes]
rs17007729	0.96[AFR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4852284	0.87[ASN][1000 genomes]
rs4852850	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4852854	0.83[ASN][1000 genomes]
rs57874021	0.96[AFR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59317730	0.91[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:72308600-72312400	Enhancers	HSMMtube	muscle
2	chr2:72309200-72311400	Enhancers	Placenta Amnion	Placenta Amnion
3	chr2:72309400-72311400	Weak transcription	NH-A	brain
4	chr2:72310400-72315800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr2:72310800-72311400	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
6	chr2:72310800-72311600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr2:72310800-72311600	Enhancers	Placenta	Placenta
8	chr2:72310800-72312400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr2:72311000-72311400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr2:72311000-72311400	Bivalent Enhancer	Fetal Stomach	stomach
11	chr2:72311000-72312000	Enhancers	NHDF-Ad	bronchial
12	chr2:72311000-72312400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr2:72311200-72311400	Enhancers	Rectal Mucosa Donor 31	rectum
14	chr2:72311200-72311400	Enhancers	NHEK	skin
15	chr2:72311200-72311600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
16	chr2:72311200-72311600	Enhancers	Fetal Muscle Leg	muscle
17	chr2:72311200-72312000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr2:72311200-72312200	Enhancers	HSMM	muscle
19	chr2:72311200-72312400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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