The 2.0 version of rSNPBase

Variant report

Variant rs4855358
Chromosome Location chr3:69228325-69228326
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69211200-69229400 Weak transcription Fetal Brain Male brain
2 chr3:69211600-69230200 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr3:69211600-69231000 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr3:69214800-69230400 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr3:69216200-69229800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr3:69217200-69230200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr3:69217400-69229800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr3:69217600-69230600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr3:69218400-69230000 Weak transcription Hela-S3 cervix
10 chr3:69218400-69247400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr3:69218400-69247800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:69218600-69228400 Weak transcription Adipose Nuclei Adipose
13 chr3:69218800-69228400 Weak transcription Colonic Mucosa Colon
14 chr3:69219200-69230000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr3:69219800-69230800 Strong transcription Placenta Placenta
16 chr3:69220600-69229600 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr3:69220800-69229800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr3:69220800-69231600 Weak transcription Psoas Muscle Psoas
19 chr3:69221000-69229400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr3:69221000-69230000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr3:69221200-69229400 Weak transcription Left Ventricle heart
22 chr3:69221200-69229800 Weak transcription Aorta Aorta
23 chr3:69221400-69229000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr3:69222000-69229400 Weak transcription HSMM muscle
25 chr3:69222800-69237400 Strong transcription Dnd41 blood
26 chr3:69222800-69245400 Strong transcription Primary neutrophils fromperipheralblood blood
27 chr3:69223400-69232600 Strong transcription Primary hematopoietic stem cells blood
28 chr3:69223400-69237600 Strong transcription Primary monocytes fromperipheralblood blood
29 chr3:69224200-69230400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr3:69224400-69230400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr3:69224400-69230600 Weak transcription H1 Cell Line embryonic stem cell
32 chr3:69224400-69237400 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr3:69225200-69232600 Strong transcription Fetal Brain Female brain
34 chr3:69225600-69229400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr3:69225600-69230000 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr3:69225600-69233200 Strong transcription Fetal Stomach stomach
37 chr3:69225800-69229000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr3:69225800-69230000 Weak transcription Ovary ovary
39 chr3:69225800-69230000 Weak transcription HSMMtube muscle
40 chr3:69225800-69230600 Weak transcription NHLF lung
41 chr3:69226400-69228400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr3:69226600-69229400 Enhancers Fetal Intestine Large intestine
43 chr3:69226600-69230400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr3:69226600-69230600 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr3:69226600-69232000 Strong transcription Brain Germinal Matrix brain
46 chr3:69226600-69232600 Genic enhancers Fetal Intestine Small intestine
47 chr3:69226800-69232600 Genic enhancers Brain Substantia Nigra brain
48 chr3:69226800-69233400 Genic enhancers HUVEC blood vessel
49 chr3:69226800-69246800 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr3:69227000-69228400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015