Variant report

Variant	rs4881315
Chromosome Location	chr10:4348235-4348236
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10795151	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10795152	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10795155	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10904225	0.86[AFR][1000 genomes]
rs4475832	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7071086	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7086185	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7096543	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7901676	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9423528	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv522540	chr10:4343047-4348396	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4334800-4349200	Weak transcription	Right Atrium	heart
2	chr10:4337800-4349200	Weak transcription	Fetal Heart	heart
3	chr10:4342800-4350600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:4344000-4348800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:4344400-4349200	Weak transcription	Fetal Brain Male	brain
6	chr10:4345400-4351400	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr10:4345400-4352400	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr10:4347600-4349200	Weak transcription	Psoas Muscle	Psoas
9	chr10:4348000-4350400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr10:4348000-4350800	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr10:4348200-4348400	Enhancers	Small Intestine	intestine
12	chr10:4348200-4349200	Weak transcription	Left Ventricle	heart
13	chr10:4348200-4350600	Enhancers	Fetal Lung	lung
14	chr10:4348200-4357200	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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