Variant report

Variant	rs7096543
Chromosome Location	chr10:4338361-4338362
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10795151	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10795152	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10795155	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4475832	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4881315	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7071086	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7086185	0.85[EUR][1000 genomes]
rs7901676	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9423528	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4334800-4339400	Weak transcription	Aorta	Aorta
2	chr10:4334800-4342600	Weak transcription	Fetal Lung	lung
3	chr10:4334800-4349200	Weak transcription	Right Atrium	heart
4	chr10:4336200-4343000	Weak transcription	NHDF-Ad	bronchial
5	chr10:4336600-4338600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr10:4336800-4338800	Enhancers	Fetal Brain Male	brain
7	chr10:4337600-4338800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr10:4337800-4345200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr10:4337800-4349200	Weak transcription	Fetal Heart	heart
10	chr10:4338200-4338800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr10:4338200-4338800	Enhancers	Brain Germinal Matrix	brain
12	chr10:4338200-4339000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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