The 2.0 version of rSNPBase

Variant report

Variant rs4885334
Chromosome Location chr13:76200552-76200553
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:76125000-76209600 Weak transcription Right Ventricle heart
2 chr13:76148200-76203000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr13:76148200-76209600 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr13:76149800-76209600 Weak transcription Lung lung
5 chr13:76159000-76209600 Weak transcription Brain Hippocampus Middle brain
6 chr13:76159400-76201800 Weak transcription Fetal Lung lung
7 chr13:76164600-76209400 Weak transcription Esophagus oesophagus
8 chr13:76165200-76209200 Weak transcription Fetal Muscle Leg muscle
9 chr13:76166800-76202000 Weak transcription Fetal Brain Female brain
10 chr13:76170800-76209600 Weak transcription Primary B cells from peripheral blood blood
11 chr13:76174600-76201400 Weak transcription Psoas Muscle Psoas
12 chr13:76177600-76209400 Weak transcription Left Ventricle heart
13 chr13:76177600-76209600 Weak transcription Fetal Stomach stomach
14 chr13:76180000-76209600 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr13:76180600-76204000 Weak transcription GM12878-XiMat blood
16 chr13:76180800-76204600 Weak transcription Dnd41 blood
17 chr13:76180800-76209200 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr13:76180800-76209200 Weak transcription Adipose Nuclei Adipose
19 chr13:76180800-76209600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr13:76181000-76209400 Weak transcription Fetal Thymus thymus
21 chr13:76181000-76209600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr13:76181000-76209600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr13:76181200-76209400 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr13:76181200-76209600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr13:76181600-76207400 Weak transcription HMEC breast
26 chr13:76182800-76209400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr13:76189600-76209400 Weak transcription Brain Inferior Temporal Lobe brain
28 chr13:76190600-76209600 Weak transcription Brain Angular Gyrus brain
29 chr13:76191000-76201200 Weak transcription Brain Anterior Caudate brain
30 chr13:76191600-76201400 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr13:76192000-76209600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr13:76192200-76209400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr13:76192600-76209600 Weak transcription Fetal Intestine Small intestine
34 chr13:76193400-76209400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr13:76196200-76207600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr13:76196800-76203600 Weak transcription NH-A brain
37 chr13:76197000-76203600 Weak transcription HSMMtube muscle
38 chr13:76197000-76209600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr13:76197600-76201600 Weak transcription NHLF lung
40 chr13:76197800-76202200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr13:76197800-76209600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr13:76198200-76201800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:76198400-76201400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr13:76198600-76202800 Strong transcription HSMM muscle
45 chr13:76198800-76200600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr13:76198800-76201200 Strong transcription Osteobl bone
47 chr13:76198800-76203000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr13:76198800-76209400 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr13:76199800-76202800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr13:76199800-76209600 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015