Variant report

Variant rs489845
Chromosome Location chr19:21474314-21474315
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21465000-21496000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:21465400-21484600 ZNF genes & repeats Liver Liver
3 chr19:21467200-21489600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr19:21469400-21474400 Weak transcription Brain Inferior Temporal Lobe brain
5 chr19:21470000-21474400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr19:21470000-21474400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr19:21470600-21484200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
8 chr19:21471200-21474400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr19:21471200-21479800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
10 chr19:21471600-21474800 Weak transcription Brain Germinal Matrix brain
11 chr19:21471600-21479800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr19:21472000-21476400 Weak transcription Osteobl bone
13 chr19:21472000-21481800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr19:21472200-21474400 Weak transcription NH-A brain
15 chr19:21472200-21487600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr19:21472200-21490400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:21472400-21475200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr19:21472800-21475800 Weak transcription HSMM muscle
19 chr19:21473000-21474400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr19:21473000-21474600 Weak transcription Primary hematopoietic stem cells blood
21 chr19:21473000-21476200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr19:21473200-21475800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr19:21473200-21476000 Weak transcription Psoas Muscle Psoas
24 chr19:21473600-21479400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
25 chr19:21473600-21479600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr19:21473600-21487200 Weak transcription Right Ventricle heart
27 chr19:21473800-21474400 Weak transcription Left Ventricle heart
28 chr19:21473800-21475200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
29 chr19:21473800-21476600 Weak transcription Stomach Smooth Muscle stomach
30 chr19:21473800-21479600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
31 chr19:21473800-21510400 Weak transcription Fetal Heart heart
32 chr19:21474000-21474400 ZNF genes & repeats Dnd41 blood
33 chr19:21474000-21478800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr19:21474000-21479200 ZNF genes & repeats Muscle Satellite Cultured Cells --
35 chr19:21474000-21481600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr19:21474000-21490600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
37 chr19:21474200-21474600 ZNF genes & repeats Brain Substantia Nigra brain
38 chr19:21474200-21474600 ZNF genes & repeats Fetal Muscle Leg muscle
39 chr19:21474200-21474800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
40 chr19:21474200-21475000 ZNF genes & repeats H1 Cell Line embryonic stem cell
41 chr19:21474200-21475200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
42 chr19:21474200-21475200 Strong transcription HSMMtube muscle
43 chr19:21474200-21475600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
44 chr19:21474200-21475800 Weak transcription Fetal Kidney kidney
45 chr19:21474200-21478200 ZNF genes & repeats Fetal Brain Female brain
46 chr19:21474200-21478600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
47 chr19:21474200-21479600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr19:21474200-21480800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
49 chr19:21474200-21482000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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