Variant report

(count:10 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ELF1	chr2:32266036-32266496	K562	blood:	n/a	n/a
2	ZNF384	chr2:32265817-32266460	K562	blood:	n/a	n/a
3	MAX	chr2:32265984-32266292	K562	blood:	n/a	n/a
4	UBTF	chr2:32266004-32266214	K562	blood:	n/a	n/a
5	MYC	chr2:32266169-32266688	K562	blood:	n/a	n/a
6	EGR1	chr2:32266087-32266282	K562	blood:	n/a	n/a
7	POLR2A	chr2:32265854-32266320	K562	blood:	n/a	n/a
8	POLR2A	chr2:32265955-32266324	K562	blood:	n/a	n/a
9	TBP	chr2:32266063-32266837	K562	blood:	n/a	n/a
10	EGR1	chr2:32266012-32266360	K562	blood:	n/a	n/a

No data

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:32264101..32266985-chr2:32387828..32391332,6	K562	blood:
2	chr2:32233869..32239615-chr2:32259766..32267170,13	K562	blood:
3	chr2:32263820..32266854-chr2:32389080..32393861,5	MCF-7	breast:
4	chr2:32256593..32258983-chr2:32264905..32266579,2	K562	blood:
5	chr2:32234151..32237531-chr2:32262421..32266825,7	K562	blood:
6	chr2:32233050..32238839-chr2:32262715..32266551,10	MCF-7	breast:
7	chr2:32262396..32266546-chr2:32286416..32291415,12	K562	blood:
8	chr2:32263267..32267327-chr2:32283931..32290396,13	MCF-7	breast:
9	chr2:32231133..32238127-chr2:32263164..32266706,7	MCF-7	breast:
10	chr2:32264894..32267187-chr2:32274162..32276934,2	MCF-7	breast:
11	chr2:32262818..32267061-chr2:32286978..32290820,6	MCF-7	breast:
12	chr2:32264868..32267001-chr2:32389298..32391324,2	K562	blood:
13	chr2:32186536..32189109-chr2:32265198..32266972,2	MCF-7	breast:

No data

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11682335	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13403364	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs160793	1.00[AMR][1000 genomes]
rs191961	1.00[AMR][1000 genomes]
rs2116030	0.81[EUR][1000 genomes]
rs216536	0.90[AFR][1000 genomes]
rs2365556	0.81[EUR][1000 genomes]
rs420731	0.84[AFR][1000 genomes]
rs469462	0.87[AFR][1000 genomes]
rs483796	0.87[EUR][1000 genomes]
rs486754	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs502824	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs533970	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs552555	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs559693	1.00[AMR][1000 genomes]
rs591625	1.00[EUR][1000 genomes]
rs624859	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs631826	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs648652	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6543650	0.87[EUR][1000 genomes]
rs7600278	1.00[AMR][1000 genomes]
rs806149	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532648	chr2:31591498-32312698	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
2	nsv949102	chr2:32030307-33011548	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:32264400-32266600	Active TSS	K562	blood
2	chr2:32265600-32268200	Weak transcription	Brain Anterior Caudate	brain
3	chr2:32265800-32266800	Weak transcription	HepG2	liver

Quick Search: