The 2.0 version of rSNPBase

Variant report

Variant rs4916313
Chromosome Location chr1:173164787-173164788
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173154400-173176200 Weak transcription Aorta Aorta
2 chr1:173158800-173170200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:173160400-173164800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:173160400-173166600 Weak transcription Rectal Smooth Muscle rectum
5 chr1:173160400-173174400 Weak transcription Spleen Spleen
6 chr1:173160600-173164800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:173160600-173171800 Weak transcription NHLF lung
8 chr1:173160600-173176000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:173160800-173168000 Weak transcription HepG2 liver
10 chr1:173160800-173171200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:173162000-173166400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:173162200-173165200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:173162400-173164800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:173163200-173171800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:173163400-173171800 Weak transcription Osteobl bone
16 chr1:173163600-173166000 Weak transcription HSMMtube muscle
17 chr1:173163800-173164800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr1:173164000-173164800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:173164200-173166200 Genic enhancers HSMM muscle
20 chr1:173164400-173164800 Enhancers GM12878-XiMat blood
21 chr1:173164400-173165400 Enhancers Primary T cells fromperipheralblood blood
22 chr1:173164400-173165400 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr1:173164400-173165800 Enhancers Primary B cells from peripheral blood blood
24 chr1:173164600-173165000 Genic enhancers Primary hematopoietic stem cells blood
25 chr1:173164600-173165000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr1:173164600-173165000 Enhancers Left Ventricle heart
27 chr1:173164600-173165200 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr1:173164600-173165200 Enhancers Primary T helper cells fromperipheralblood blood
29 chr1:173164600-173165200 Enhancers Fetal Thymus thymus
30 chr1:173164600-173165400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:173164600-173165800 Enhancers Primary B cells from cord blood blood
32 chr1:173164600-173166000 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr1:173164600-173166200 Genic enhancers HUVEC blood vessel
34 chr1:173164600-173166400 Enhancers Dnd41 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015