Variant report

Variant	rs4916371
Chromosome Location	chr1:173533572-173533573
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10753082	0.84[AMR][1000 genomes]
rs10753083	0.82[AMR][1000 genomes]
rs10912650	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12075314	0.84[AMR][1000 genomes]
rs12080722	0.84[AMR][1000 genomes]
rs1359460	0.82[AMR][1000 genomes]
rs1461022	0.82[AMR][1000 genomes]
rs1461024	0.82[AMR][1000 genomes]
rs1461025	0.84[AMR][1000 genomes]
rs1547154	0.84[AMR][1000 genomes]
rs1570813	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1886638	0.82[AMR][1000 genomes]
rs4573551	0.80[AMR][1000 genomes]
rs4916366	0.84[AMR][1000 genomes]
rs4916367	0.84[AMR][1000 genomes]
rs7535963	0.84[AMR][1000 genomes]
rs7551305	0.84[AMR][1000 genomes]
rs912768	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872549	chr1:173509586-173546835	Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173533400-173533600	Flanking Active TSS	NHDF-Ad	bronchial

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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