The 2.0 version of rSNPBase

Variant report

Variant rs4951582
Chromosome Location chr1:212408780-212408781
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212401800-212409000 Weak transcription Gastric stomach
2 chr1:212403400-212409000 Weak transcription Fetal Intestine Large intestine
3 chr1:212403600-212409600 Weak transcription Liver Liver
4 chr1:212404800-212410800 Enhancers Skeletal Muscle Male skeletal muscle
5 chr1:212405200-212408800 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr1:212405200-212410600 Enhancers Primary monocytes fromperipheralblood blood
7 chr1:212405600-212409000 Weak transcription Esophagus oesophagus
8 chr1:212405600-212414800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:212405600-212416400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:212406400-212411000 Enhancers HSMMtube muscle
11 chr1:212406600-212409200 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr1:212406600-212410800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:212406800-212408800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:212406800-212409800 Enhancers Fetal Muscle Leg muscle
15 chr1:212406800-212410400 Enhancers HSMM muscle
16 chr1:212406800-212410600 Enhancers Stomach Mucosa stomach
17 chr1:212407000-212409200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:212407200-212410400 Enhancers Left Ventricle heart
19 chr1:212407400-212408800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:212407600-212408800 Enhancers Hela-S3 cervix
21 chr1:212407600-212408800 Enhancers NHEK skin
22 chr1:212407600-212409200 Enhancers NHLF lung
23 chr1:212407600-212410000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:212407600-212412400 Enhancers Duodenum Mucosa Duodenum
25 chr1:212407800-212408800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:212407800-212409600 Enhancers Right Atrium heart
27 chr1:212407800-212409800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:212407800-212410400 Enhancers Sigmoid Colon Sigmoid Colon
29 chr1:212407800-212412800 Enhancers Rectal Mucosa Donor 31 rectum
30 chr1:212408000-212409000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:212408000-212409200 Weak transcription Right Ventricle heart
32 chr1:212408000-212410600 Enhancers Fetal Heart heart
33 chr1:212408000-212411600 Weak transcription Fetal Muscle Trunk muscle
34 chr1:212408000-212411800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:212408000-212413000 Enhancers Skeletal Muscle Female skeletal muscle
36 chr1:212408200-212409600 Enhancers Primary neutrophils fromperipheralblood blood
37 chr1:212408200-212409800 Enhancers Small Intestine intestine
38 chr1:212408200-212415400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:212408400-212408800 Enhancers Stomach Smooth Muscle stomach
40 chr1:212408400-212409800 Enhancers Lung lung
41 chr1:212408400-212410200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:212408400-212411600 Weak transcription Primary hematopoietic stem cells blood
43 chr1:212408400-212415600 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:212408600-212409000 Enhancers Pancreas Pancrea
45 chr1:212408600-212409000 Enhancers Monocytes-CD14+_RO01746 blood
46 chr1:212408600-212409200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:212408600-212409200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:212408600-212409400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:212408600-212409400 Weak transcription Psoas Muscle Psoas
50 chr1:212408600-212409600 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015