The 2.0 version of rSNPBase

Variant report

Variant rs903120
Chromosome Location chr1:212405172-212405173
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212399400-212405200 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr1:212399800-212405200 Weak transcription Primary monocytes fromperipheralblood blood
3 chr1:212399800-212406600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:212399800-212407800 Weak transcription Brain Anterior Caudate brain
5 chr1:212400000-212405200 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr1:212400000-212405200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:212400000-212405200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:212400000-212405200 Weak transcription Fetal Thymus thymus
9 chr1:212400000-212407600 Weak transcription Spleen Spleen
10 chr1:212400000-212407800 Weak transcription Right Atrium heart
11 chr1:212400000-212407800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:212400200-212405400 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:212400200-212406800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:212401400-212408400 Weak transcription Lung lung
15 chr1:212401800-212409000 Weak transcription Gastric stomach
16 chr1:212402400-212407800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:212402800-212405800 Enhancers Stomach Mucosa stomach
18 chr1:212403400-212405600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:212403400-212409000 Weak transcription Fetal Intestine Large intestine
20 chr1:212403600-212407000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:212403600-212407600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:212403600-212408200 Weak transcription Small Intestine intestine
23 chr1:212403600-212409600 Weak transcription Liver Liver
24 chr1:212403800-212407600 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:212403800-212407600 Weak transcription NHDF-Ad bronchial
26 chr1:212403800-212407600 Weak transcription Osteobl bone
27 chr1:212404000-212407200 Weak transcription Right Ventricle heart
28 chr1:212404400-212405200 Enhancers HepG2 liver
29 chr1:212404400-212405800 Enhancers K562 blood
30 chr1:212404600-212405600 Enhancers Esophagus oesophagus
31 chr1:212404600-212405600 Enhancers Pancreas Pancrea
32 chr1:212404600-212405800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:212404600-212407800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:212404800-212405200 Enhancers Skeletal Muscle Female skeletal muscle
35 chr1:212404800-212405400 Enhancers Fetal Heart heart
36 chr1:212404800-212405600 Enhancers Left Ventricle heart
37 chr1:212404800-212405800 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr1:212404800-212410800 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:212405000-212405600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr1:212405000-212405600 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr1:212405000-212405600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:212405000-212406800 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015