Variant report

Variant	rs4951717
Chromosome Location	chr1:211243616-211243617
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1338348	0.98[ASN][1000 genomes]
rs17017167	0.98[ASN][1000 genomes]
rs17017172	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17017197	0.98[ASN][1000 genomes]
rs17017204	0.97[ASN][1000 genomes]
rs17017208	0.90[ASN][1000 genomes]
rs4951500	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4951501	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4951503	0.98[ASN][1000 genomes]
rs4951715	0.89[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211228400-211248200	Weak transcription	Brain Anterior Caudate	brain
2	chr1:211229800-211248400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr1:211234600-211248400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr1:211236000-211248600	Strong transcription	HSMM	muscle
5	chr1:211236800-211248000	Weak transcription	Brain Hippocampus Middle	brain
6	chr1:211241200-211248200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr1:211241600-211249000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr1:211242000-211244400	Strong transcription	HSMMtube	muscle
9	chr1:211242600-211248800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr1:211242600-211256400	Weak transcription	A549	lung
11	chr1:211243400-211247800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:211243400-211248000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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