The 2.0 version of rSNPBase

Variant report

Variant rs4955549
Chromosome Location chr3:134284011-134284012
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:134256600-134287200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:134269800-134286400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:134269800-134296600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:134270000-134286000 Weak transcription Psoas Muscle Psoas
5 chr3:134270600-134285200 Weak transcription Brain Germinal Matrix brain
6 chr3:134271200-134284800 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:134271400-134286400 Weak transcription Spleen Spleen
8 chr3:134271400-134287800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr3:134272000-134289800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr3:134272200-134287200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr3:134272800-134284400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr3:134272800-134284800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr3:134272800-134285000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr3:134273000-134285600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:134278800-134286400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr3:134279400-134284400 Strong transcription Primary hematopoietic stem cells blood
17 chr3:134279400-134284400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr3:134279400-134284800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr3:134279400-134285200 Weak transcription Esophagus oesophagus
20 chr3:134279400-134285400 Weak transcription GM12878-XiMat blood
21 chr3:134279400-134287200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr3:134279400-134288600 Weak transcription HSMMtube muscle
23 chr3:134279600-134285800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:134279600-134286200 Weak transcription Fetal Intestine Small intestine
25 chr3:134280400-134285000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr3:134280800-134284400 Strong transcription Primary T cells from cord blood blood
27 chr3:134280800-134286800 Weak transcription Brain Anterior Caudate brain
28 chr3:134281000-134285800 Weak transcription Liver Liver
29 chr3:134281000-134286200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr3:134281200-134286400 Weak transcription Fetal Kidney kidney
31 chr3:134281200-134288400 Weak transcription Duodenum Mucosa Duodenum
32 chr3:134281400-134285200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr3:134281600-134284800 Weak transcription Ovary ovary
34 chr3:134281600-134285000 Weak transcription Fetal Intestine Large intestine
35 chr3:134281600-134285200 Weak transcription Right Ventricle heart
36 chr3:134281600-134286400 Weak transcription Fetal Lung lung
37 chr3:134281600-134287600 Weak transcription Brain Cingulate Gyrus brain
38 chr3:134281600-134297600 Weak transcription Gastric stomach
39 chr3:134281800-134285800 Weak transcription Adipose Nuclei Adipose
40 chr3:134281800-134287800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr3:134282000-134286400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr3:134282000-134286400 Weak transcription Primary B cells from peripheral blood blood
43 chr3:134282000-134286600 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr3:134282200-134284800 Weak transcription H9 Cell Line embryonic stem cell
45 chr3:134282200-134284800 Weak transcription Fetal Thymus thymus
46 chr3:134282200-134287800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr3:134282400-134284600 Weak transcription Primary T cells fromperipheralblood blood
48 chr3:134282800-134284200 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr3:134283200-134285000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr3:134283200-134287000 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015