The 2.0 version of rSNPBase

Variant report

Variant rs6777283
Chromosome Location chr3:134280395-134280396
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:134246200-134280800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:134246600-134281800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:134250400-134282000 Weak transcription Stomach Mucosa stomach
4 chr3:134256600-134287200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:134256800-134280800 Weak transcription Right Ventricle heart
6 chr3:134267800-134281200 Weak transcription A549 lung
7 chr3:134269800-134280800 Weak transcription Gastric stomach
8 chr3:134269800-134281800 Weak transcription H9 Cell Line embryonic stem cell
9 chr3:134269800-134282800 Weak transcription NHLF lung
10 chr3:134269800-134286400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr3:134269800-134296600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr3:134270000-134280600 Weak transcription Brain Cingulate Gyrus brain
13 chr3:134270000-134282800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr3:134270000-134283000 Weak transcription Small Intestine intestine
15 chr3:134270000-134286000 Weak transcription Psoas Muscle Psoas
16 chr3:134270200-134280800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr3:134270200-134281800 Weak transcription NHEK skin
18 chr3:134270400-134280800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr3:134270400-134281000 Weak transcription Fetal Kidney kidney
20 chr3:134270600-134285200 Weak transcription Brain Germinal Matrix brain
21 chr3:134271200-134280800 Weak transcription Thymus Thymus
22 chr3:134271200-134282600 Weak transcription Rectal Smooth Muscle rectum
23 chr3:134271200-134284800 Weak transcription Placenta Amnion Placenta Amnion
24 chr3:134271400-134280800 Weak transcription Ovary ovary
25 chr3:134271400-134282600 Weak transcription Lung lung
26 chr3:134271400-134286400 Weak transcription Spleen Spleen
27 chr3:134271400-134287800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr3:134271800-134281800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr3:134272000-134289800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr3:134272200-134280800 Weak transcription Fetal Brain Female brain
31 chr3:134272200-134281800 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr3:134272200-134287200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr3:134272600-134282600 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr3:134272600-134282800 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr3:134272600-134283200 Weak transcription Colon Smooth Muscle Colon
36 chr3:134272800-134280600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr3:134272800-134280800 Weak transcription HMEC breast
38 chr3:134272800-134281000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr3:134272800-134282000 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr3:134272800-134283400 Weak transcription HUVEC blood vessel
41 chr3:134272800-134284400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr3:134272800-134284800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr3:134272800-134285000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr3:134273000-134285600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr3:134275200-134280600 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr3:134275200-134281000 Strong transcription Liver Liver
47 chr3:134275200-134283400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:134275400-134281400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr3:134276000-134282000 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr3:134276600-134280400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015