Variant report

No.	Distal block	Cell Line	Cell type
1	1:151411623-151426875..1:151461759-151468043	Hela-S3	cervix:
2	chr1:151455325..151461982-chr1:151483284..151488715,8	MCF-7	breast:
3	1:151461759-151468043..1:151516085-151535167	Hela-S3	cervix:
4	1:151461759-151468043..1:151618750-151636526	K562	blood:
5	chr1:151460478..151462876-chr1:151481664..151484216,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10127622	0.91[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs10788807	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs10888416	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10888419	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs11204827	0.92[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11204828	0.92[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11204838	0.91[JPT][hapmap]
rs11590129	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11801161	0.85[JPT][hapmap]
rs1547832	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs1573129	0.82[JPT][hapmap]
rs1573130	0.91[JPT][hapmap]
rs2211435	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs2298167	0.91[JPT][hapmap]
rs2298168	0.91[JPT][hapmap]
rs2337359	0.91[JPT][hapmap]
rs2337364	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2878950	0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs35562327	0.92[ASN][1000 genomes]
rs4970954	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7355117	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7552458	0.85[CHB][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916272	chr1:150961809-151557253	Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	219 gene(s)	inside rSNPs	diseases
2	nsv831581	chr1:151289151-151478605	Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:151459400-151468200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:151459600-151463200	Weak transcription	K562	blood
3	chr1:151459600-151464400	Weak transcription	HepG2	liver
4	chr1:151461000-151465000	Enhancers	GM12878-XiMat	blood

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