The 2.0 version of rSNPBase

Variant report

Variant rs4970969
Chromosome Location chr1:150612361-150612362
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150603000-150619000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:150603000-150619600 Weak transcription Small Intestine intestine
3 chr1:150603200-150616600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:150603200-150617400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:150603200-150618600 Weak transcription Stomach Smooth Muscle stomach
6 chr1:150603200-150619600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:150603200-150619600 Weak transcription Fetal Intestine Small intestine
8 chr1:150603200-150619600 Weak transcription Fetal Stomach stomach
9 chr1:150603200-150619800 Weak transcription Brain Cingulate Gyrus brain
10 chr1:150603200-150620000 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:150603200-150620000 Weak transcription Gastric stomach
12 chr1:150603200-150620000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:150603200-150620600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:150603200-150620600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:150603200-150661200 Weak transcription Brain Substantia Nigra brain
16 chr1:150603400-150616800 Weak transcription Liver Liver
17 chr1:150603400-150618000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:150603400-150618200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:150603400-150618200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:150603400-150618200 Weak transcription Adipose Nuclei Adipose
21 chr1:150603400-150618800 Weak transcription Osteobl bone
22 chr1:150603400-150619000 Weak transcription Fetal Muscle Trunk muscle
23 chr1:150603400-150620000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:150603400-150620400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:150603400-150620600 Weak transcription Right Ventricle heart
26 chr1:150603400-150620600 Weak transcription A549 lung
27 chr1:150603400-150620800 Weak transcription Spleen Spleen
28 chr1:150603400-150621600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:150603400-150621600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:150603400-150668200 Weak transcription Brain Germinal Matrix brain
31 chr1:150603600-150615800 Weak transcription Fetal Muscle Leg muscle
32 chr1:150603600-150618200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:150603600-150619800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:150603800-150619400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:150604000-150618000 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr1:150604200-150619600 Weak transcription Left Ventricle heart
37 chr1:150604200-150620400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:150607400-150620600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:150608000-150619600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:150608200-150613200 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:150608200-150618200 Weak transcription Primary B cells from cord blood blood
42 chr1:150608200-150618400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr1:150608200-150619200 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr1:150608400-150613400 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:150608400-150613800 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr1:150608400-150617600 Weak transcription Primary B cells from peripheral blood blood
47 chr1:150608400-150618000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:150608400-150618400 Weak transcription Primary hematopoietic stem cells blood
49 chr1:150608400-150618400 Weak transcription Placenta Placenta
50 chr1:150608600-150613000 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015