The 2.0 version of rSNPBase

Variant report

Variant rs6681426
Chromosome Location chr1:150586971-150586972
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150553200-150592000 Weak transcription Fetal Kidney kidney
2 chr1:150573400-150587800 Weak transcription Brain Germinal Matrix brain
3 chr1:150576200-150591000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:150577000-150588400 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:150577400-150587800 Weak transcription Esophagus oesophagus
6 chr1:150578000-150592600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:150581600-150587000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:150582200-150587800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:150582200-150588800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr1:150582400-150588800 Enhancers Primary T helper cells fromperipheralblood blood
11 chr1:150582400-150594400 Weak transcription Ovary ovary
12 chr1:150582600-150591800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:150582800-150587800 Weak transcription Fetal Brain Male brain
14 chr1:150583000-150587000 Enhancers Primary B cells from peripheral blood blood
15 chr1:150583000-150587600 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr1:150583000-150588000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
17 chr1:150583200-150588000 Genic enhancers Fetal Intestine Small intestine
18 chr1:150583200-150589000 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr1:150583400-150588200 Enhancers Sigmoid Colon Sigmoid Colon
20 chr1:150583600-150588000 Enhancers Liver Liver
21 chr1:150584000-150587000 Enhancers Skeletal Muscle Male skeletal muscle
22 chr1:150584000-150588600 Strong transcription Fetal Brain Female brain
23 chr1:150584200-150587000 Enhancers Skeletal Muscle Female skeletal muscle
24 chr1:150584200-150587600 Weak transcription Fetal Lung lung
25 chr1:150584400-150588600 Enhancers Rectal Mucosa Donor 31 rectum
26 chr1:150584400-150594800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:150584400-150600600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr1:150584600-150588200 Strong transcription HUES6 Cell Line embryonic stem cell
29 chr1:150584600-150589400 Weak transcription Brain Anterior Caudate brain
30 chr1:150584800-150587200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:150584800-150587600 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr1:150584800-150587600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:150584800-150587800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr1:150584800-150589600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr1:150584800-150591400 Weak transcription Right Ventricle heart
36 chr1:150584800-150591600 Weak transcription Rectal Smooth Muscle rectum
37 chr1:150584800-150594400 Weak transcription Gastric stomach
38 chr1:150584800-150596200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:150584800-150600200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:150585000-150600000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:150585200-150587000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
42 chr1:150585200-150600200 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr1:150585400-150587000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:150585400-150587200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:150585400-150588000 Enhancers Stomach Mucosa stomach
46 chr1:150585400-150594200 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:150585600-150587000 Genic enhancers Breast Myoepithelial Primary Cells Breast
48 chr1:150585600-150587200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
49 chr1:150585600-150587200 Enhancers Fetal Intestine Large intestine
50 chr1:150585600-150588800 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015