The 2.0 version of rSNPBase

Variant report

Variant rs2175616
Chromosome Location chr1:150631057-150631058
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150603200-150661200 Weak transcription Brain Substantia Nigra brain
2 chr1:150603400-150668200 Weak transcription Brain Germinal Matrix brain
3 chr1:150608600-150668600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:150612600-150634400 Weak transcription Psoas Muscle Psoas
5 chr1:150616200-150634400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:150618800-150660400 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:150619200-150637800 Weak transcription Fetal Heart heart
8 chr1:150620200-150634200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:150620800-150632200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:150621000-150635600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:150621000-150640400 Weak transcription Small Intestine intestine
12 chr1:150621000-150660800 Weak transcription Colon Smooth Muscle Colon
13 chr1:150621200-150632200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:150621200-150632200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:150621200-150632800 Weak transcription K562 blood
16 chr1:150621200-150632800 Weak transcription NHLF lung
17 chr1:150621200-150633200 Weak transcription HMEC breast
18 chr1:150621200-150633800 Weak transcription NH-A brain
19 chr1:150621200-150660400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:150621200-150664800 Weak transcription Fetal Brain Female brain
21 chr1:150621200-150665000 Weak transcription Fetal Kidney kidney
22 chr1:150621200-150669400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:150621400-150632800 Weak transcription Brain Hippocampus Middle brain
24 chr1:150621400-150634400 Weak transcription Brain Anterior Caudate brain
25 chr1:150621400-150635200 Weak transcription GM12878-XiMat blood
26 chr1:150621400-150637000 Weak transcription Fetal Brain Male brain
27 chr1:150621400-150639400 Weak transcription HepG2 liver
28 chr1:150621400-150644200 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr1:150621400-150660400 Weak transcription HSMM muscle
30 chr1:150621600-150633800 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:150621600-150639600 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:150621800-150661200 Weak transcription NHDF-Ad bronchial
33 chr1:150621800-150668600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:150622000-150631800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:150622000-150632600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:150622000-150633000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:150622000-150633000 Weak transcription Osteobl bone
38 chr1:150622000-150634000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:150622000-150661400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:150622000-150668600 Weak transcription HSMMtube muscle
41 chr1:150622000-150669400 Weak transcription Esophagus oesophagus
42 chr1:150622200-150632600 Weak transcription A549 lung
43 chr1:150622200-150633600 Weak transcription HUVEC blood vessel
44 chr1:150622200-150660600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr1:150622600-150632200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:150622800-150637000 Weak transcription Brain Cingulate Gyrus brain
47 chr1:150623000-150631800 Weak transcription Primary B cells from cord blood blood
48 chr1:150623000-150633000 Weak transcription Fetal Lung lung
49 chr1:150623200-150631200 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:150623200-150631600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015