The 2.0 version of rSNPBase

Variant report

Variant rs2230061
Chromosome Location chr1:150727539-150727540
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150704000-150736600 Weak transcription Fetal Stomach stomach
2 chr1:150708400-150733000 Weak transcription Fetal Intestine Large intestine
3 chr1:150710200-150729200 Weak transcription Psoas Muscle Psoas
4 chr1:150711000-150735600 Weak transcription Rectal Smooth Muscle rectum
5 chr1:150712000-150737800 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:150714800-150732200 Weak transcription Stomach Mucosa stomach
7 chr1:150715600-150728000 Weak transcription Brain Anterior Caudate brain
8 chr1:150715800-150736200 Weak transcription Small Intestine intestine
9 chr1:150716600-150737000 Weak transcription Pancreas Pancrea
10 chr1:150717000-150730800 Strong transcription Primary T helper cells PMA-I stimulated --
11 chr1:150717000-150731000 Strong transcription Primary T cells fromperipheralblood blood
12 chr1:150717000-150731400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:150717000-150732000 Strong transcription Primary B cells from cord blood blood
14 chr1:150717000-150732200 Strong transcription Primary B cells from peripheral blood blood
15 chr1:150717000-150732200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:150717000-150732400 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr1:150717000-150732800 Strong transcription Duodenum Mucosa Duodenum
18 chr1:150717000-150733000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:150717200-150728000 Strong transcription Primary T helper naive cells from peripheral blood blood
20 chr1:150717200-150730600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:150717200-150730800 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr1:150717200-150731000 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr1:150717200-150733600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:150717400-150730600 Strong transcription Primary T cells from cord blood blood
25 chr1:150717400-150731400 Strong transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:150720200-150736200 Weak transcription Colonic Mucosa Colon
27 chr1:150720600-150737800 Weak transcription Brain Substantia Nigra brain
28 chr1:150722400-150737000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:150722600-150730600 Strong transcription Liver Liver
30 chr1:150723000-150727800 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr1:150723000-150738000 Weak transcription Right Ventricle heart
32 chr1:150723200-150729800 Strong transcription Spleen Spleen
33 chr1:150723600-150727800 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr1:150724000-150727800 Strong transcription Adipose Nuclei Adipose
35 chr1:150724200-150733200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:150724400-150730200 Strong transcription GM12878-XiMat blood
37 chr1:150724400-150730800 Strong transcription Primary hematopoietic stem cells blood
38 chr1:150724400-150737800 Weak transcription Aorta Aorta
39 chr1:150724600-150730400 Strong transcription Primary monocytes fromperipheralblood blood
40 chr1:150724600-150736200 Weak transcription Gastric stomach
41 chr1:150724600-150736400 Weak transcription Esophagus oesophagus
42 chr1:150724800-150729000 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:150724800-150733000 Weak transcription Fetal Intestine Small intestine
44 chr1:150725000-150728600 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr1:150725600-150729600 Strong transcription Fetal Thymus thymus
46 chr1:150725800-150731400 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr1:150726000-150727800 Strong transcription Lung lung
48 chr1:150726200-150730800 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr1:150726200-150730800 Strong transcription Sigmoid Colon Sigmoid Colon
50 chr1:150726400-150729200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015