Variant report

Variant rs3087960
Chromosome Location chr1:150620569-150620570
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150603200-150620600 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:150603200-150620600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:150603200-150661200 Weak transcription Brain Substantia Nigra brain
4 chr1:150603400-150620600 Weak transcription Right Ventricle heart
5 chr1:150603400-150620600 Weak transcription A549 lung
6 chr1:150603400-150620800 Weak transcription Spleen Spleen
7 chr1:150603400-150621600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:150603400-150621600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:150603400-150668200 Weak transcription Brain Germinal Matrix brain
10 chr1:150607400-150620600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:150608600-150620600 Weak transcription Hela-S3 cervix
12 chr1:150608600-150668600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:150611200-150620800 Weak transcription Pancreas Pancrea
14 chr1:150612600-150634400 Weak transcription Psoas Muscle Psoas
15 chr1:150614600-150620600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:150615000-150620800 Weak transcription NHDF-Ad bronchial
17 chr1:150615000-150631000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:150616200-150620600 Weak transcription NHEK skin
19 chr1:150616200-150634400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr1:150616800-150622000 Strong transcription Liver Liver
21 chr1:150617400-150622000 Strong transcription Rectal Mucosa Donor 31 rectum
22 chr1:150617400-150623400 Strong transcription Dnd41 blood
23 chr1:150617600-150622200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:150617600-150623200 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:150617600-150623400 Strong transcription Fetal Thymus thymus
26 chr1:150617600-150623600 Strong transcription Primary B cells from peripheral blood blood
27 chr1:150617600-150627600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:150618000-150621600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:150618000-150622200 Strong transcription Duodenum Mucosa Duodenum
30 chr1:150618000-150622200 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr1:150618000-150622600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:150618000-150623600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:150618200-150621800 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr1:150618200-150622000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:150618200-150622000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:150618200-150622200 Strong transcription Adipose Nuclei Adipose
37 chr1:150618200-150622800 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr1:150618200-150623000 Strong transcription Primary B cells from cord blood blood
39 chr1:150618200-150623000 Strong transcription Fetal Lung lung
40 chr1:150618200-150623200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:150618200-150623200 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr1:150618200-150623200 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:150618200-150624600 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr1:150618400-150620800 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr1:150618400-150621400 Strong transcription GM12878-XiMat blood
46 chr1:150618400-150621800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:150618400-150622000 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr1:150618400-150622000 Strong transcription Placenta Placenta
49 chr1:150618400-150622200 Strong transcription HUVEC blood vessel
50 chr1:150618400-150622400 Strong transcription Fetal Intestine Large intestine

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