The 2.0 version of rSNPBase

Variant report

Variant rs11204687
Chromosome Location chr1:150629880-150629881
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150603200-150661200 Weak transcription Brain Substantia Nigra brain
2 chr1:150603400-150668200 Weak transcription Brain Germinal Matrix brain
3 chr1:150608600-150668600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:150612600-150634400 Weak transcription Psoas Muscle Psoas
5 chr1:150615000-150631000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:150616200-150634400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:150618800-150660400 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:150619200-150637800 Weak transcription Fetal Heart heart
9 chr1:150620200-150634200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:150620800-150632200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:150621000-150635600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:150621000-150640400 Weak transcription Small Intestine intestine
13 chr1:150621000-150660800 Weak transcription Colon Smooth Muscle Colon
14 chr1:150621200-150630000 Weak transcription Aorta Aorta
15 chr1:150621200-150630800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:150621200-150632200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:150621200-150632200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:150621200-150632800 Weak transcription K562 blood
19 chr1:150621200-150632800 Weak transcription NHLF lung
20 chr1:150621200-150633200 Weak transcription HMEC breast
21 chr1:150621200-150633800 Weak transcription NH-A brain
22 chr1:150621200-150660400 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:150621200-150664800 Weak transcription Fetal Brain Female brain
24 chr1:150621200-150665000 Weak transcription Fetal Kidney kidney
25 chr1:150621200-150669400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:150621400-150632800 Weak transcription Brain Hippocampus Middle brain
27 chr1:150621400-150634400 Weak transcription Brain Anterior Caudate brain
28 chr1:150621400-150635200 Weak transcription GM12878-XiMat blood
29 chr1:150621400-150637000 Weak transcription Fetal Brain Male brain
30 chr1:150621400-150639400 Weak transcription HepG2 liver
31 chr1:150621400-150644200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:150621400-150660400 Weak transcription HSMM muscle
33 chr1:150621600-150630600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:150621600-150633800 Weak transcription H9 Cell Line embryonic stem cell
35 chr1:150621600-150639600 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:150621800-150631000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:150621800-150661200 Weak transcription NHDF-Ad bronchial
38 chr1:150621800-150668600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr1:150622000-150630600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:150622000-150630800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:150622000-150630800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:150622000-150631000 Weak transcription Placenta Placenta
43 chr1:150622000-150631800 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:150622000-150632600 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:150622000-150633000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:150622000-150633000 Weak transcription Osteobl bone
47 chr1:150622000-150634000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:150622000-150661400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:150622000-150668600 Weak transcription HSMMtube muscle
50 chr1:150622000-150669400 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015