Variant report

Variant rs2280078
Chromosome Location chr1:150600181-150600182
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150584400-150600600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:150584800-150600200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:150585200-150600200 Strong transcription iPS-20b Cell Line embryonic stem cell
4 chr1:150586600-150600400 Strong transcription Fetal Muscle Trunk muscle
5 chr1:150587800-150600400 Strong transcription Brain Germinal Matrix brain
6 chr1:150588200-150600200 Strong transcription Fetal Intestine Large intestine
7 chr1:150588600-150601000 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:150591800-150600600 Genic enhancers HMEC breast
9 chr1:150592600-150600400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:150592800-150600200 Genic enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:150592800-150600200 Strong transcription Fetal Intestine Small intestine
12 chr1:150593000-150600200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:150593000-150600600 Strong transcription Fetal Stomach stomach
14 chr1:150593200-150600400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:150593400-150600400 Strong transcription Fetal Muscle Leg muscle
16 chr1:150593600-150600200 Strong transcription Osteobl bone
17 chr1:150594200-150600200 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr1:150594200-150600200 Strong transcription Colon Smooth Muscle Colon
19 chr1:150594200-150600400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:150594200-150600600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:150594400-150600200 Strong transcription NH-A brain
22 chr1:150594600-150600200 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr1:150594600-150600200 Strong transcription HSMM muscle
24 chr1:150594800-150600200 Strong transcription iPS-18 Cell Line embryonic stem cell
25 chr1:150595000-150600200 Strong transcription Primary B cells from peripheral blood blood
26 chr1:150595000-150600200 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr1:150595000-150600200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
28 chr1:150595200-150600200 Strong transcription Primary monocytes fromperipheralblood blood
29 chr1:150595400-150600200 Strong transcription Primary T cells fromperipheralblood blood
30 chr1:150595400-150600200 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr1:150595400-150600200 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr1:150595400-150600200 Strong transcription Rectal Smooth Muscle rectum
33 chr1:150595400-150600200 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr1:150595800-150600200 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr1:150595800-150600200 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:150595800-150600200 Strong transcription Fetal Thymus thymus
37 chr1:150595800-150600200 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr1:150595800-150600200 Strong transcription Stomach Smooth Muscle stomach
39 chr1:150595800-150600400 Strong transcription Left Ventricle heart
40 chr1:150595800-150600400 Strong transcription NHLF lung
41 chr1:150595800-150600800 Weak transcription Right Atrium heart
42 chr1:150596000-150600200 Strong transcription HUES6 Cell Line embryonic stem cell
43 chr1:150596000-150600200 Strong transcription Muscle Satellite Cultured Cells --
44 chr1:150596600-150600200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:150596600-150600200 Strong transcription HUVEC blood vessel
46 chr1:150596600-150600600 Weak transcription Esophagus oesophagus
47 chr1:150597000-150600200 Strong transcription A549 lung
48 chr1:150597400-150600400 Strong transcription ES-I3 Cell Line embryonic stem cell
49 chr1:150597800-150600200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:150598000-150600600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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