The 2.0 version of rSNPBase

Variant report

Variant rs1532770
Chromosome Location chr1:150725335-150725336
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150701400-150727400 Weak transcription Left Ventricle heart
2 chr1:150704000-150736600 Weak transcription Fetal Stomach stomach
3 chr1:150708400-150733000 Weak transcription Fetal Intestine Large intestine
4 chr1:150709000-150727400 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:150710200-150729200 Weak transcription Psoas Muscle Psoas
6 chr1:150711000-150735600 Weak transcription Rectal Smooth Muscle rectum
7 chr1:150712000-150737800 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:150714800-150732200 Weak transcription Stomach Mucosa stomach
9 chr1:150715600-150728000 Weak transcription Brain Anterior Caudate brain
10 chr1:150715800-150736200 Weak transcription Small Intestine intestine
11 chr1:150716600-150737000 Weak transcription Pancreas Pancrea
12 chr1:150717000-150730800 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr1:150717000-150731000 Strong transcription Primary T cells fromperipheralblood blood
14 chr1:150717000-150731400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:150717000-150732000 Strong transcription Primary B cells from cord blood blood
16 chr1:150717000-150732200 Strong transcription Primary B cells from peripheral blood blood
17 chr1:150717000-150732200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:150717000-150732400 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr1:150717000-150732800 Strong transcription Duodenum Mucosa Duodenum
20 chr1:150717000-150733000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:150717200-150728000 Strong transcription Primary T helper naive cells from peripheral blood blood
22 chr1:150717200-150730600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:150717200-150730800 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:150717200-150731000 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr1:150717200-150733600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:150717400-150730600 Strong transcription Primary T cells from cord blood blood
27 chr1:150717400-150731400 Strong transcription Primary T helper naive cells fromperipheralblood blood
28 chr1:150719800-150726600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:150720000-150727400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr1:150720200-150736200 Weak transcription Colonic Mucosa Colon
31 chr1:150720400-150725600 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:150720400-150727000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr1:150720600-150737800 Weak transcription Brain Substantia Nigra brain
34 chr1:150722400-150725800 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr1:150722400-150737000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:150722600-150730600 Strong transcription Liver Liver
37 chr1:150722800-150726400 Genic enhancers Rectal Mucosa Donor 31 rectum
38 chr1:150723000-150725400 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr1:150723000-150727800 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr1:150723000-150738000 Weak transcription Right Ventricle heart
41 chr1:150723200-150729800 Strong transcription Spleen Spleen
42 chr1:150723600-150727800 Strong transcription Duodenum Smooth Muscle Duodenum
43 chr1:150724000-150725600 Strong transcription Sigmoid Colon Sigmoid Colon
44 chr1:150724000-150727800 Strong transcription Adipose Nuclei Adipose
45 chr1:150724200-150733200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:150724400-150730200 Strong transcription GM12878-XiMat blood
47 chr1:150724400-150730800 Strong transcription Primary hematopoietic stem cells blood
48 chr1:150724400-150737800 Weak transcription Aorta Aorta
49 chr1:150724600-150726000 Weak transcription Lung lung
50 chr1:150724600-150730400 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015