The 2.0 version of rSNPBase

Variant report

Variant rs2864869
Chromosome Location chr1:150734655-150734656
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150704000-150736600 Weak transcription Fetal Stomach stomach
2 chr1:150711000-150735600 Weak transcription Rectal Smooth Muscle rectum
3 chr1:150712000-150737800 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr1:150715800-150736200 Weak transcription Small Intestine intestine
5 chr1:150716600-150737000 Weak transcription Pancreas Pancrea
6 chr1:150720200-150736200 Weak transcription Colonic Mucosa Colon
7 chr1:150720600-150737800 Weak transcription Brain Substantia Nigra brain
8 chr1:150722400-150737000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:150723000-150738000 Weak transcription Right Ventricle heart
10 chr1:150724400-150737800 Weak transcription Aorta Aorta
11 chr1:150724600-150736200 Weak transcription Gastric stomach
12 chr1:150724600-150736400 Weak transcription Esophagus oesophagus
13 chr1:150727800-150736200 Weak transcription Adipose Nuclei Adipose
14 chr1:150727800-150736200 Weak transcription Lung lung
15 chr1:150727800-150736400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:150727800-150737000 Weak transcription Thymus Thymus
17 chr1:150729200-150737600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:150729800-150737000 Weak transcription Spleen Spleen
19 chr1:150730000-150736200 Weak transcription Fetal Thymus thymus
20 chr1:150730600-150735000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:150730600-150735000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:150730800-150738000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:150731000-150736200 Weak transcription Primary T cells fromperipheralblood blood
24 chr1:150732200-150736200 Genic enhancers Primary B cells from peripheral blood blood
25 chr1:150732200-150737200 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
26 chr1:150732400-150737400 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
27 chr1:150733200-150735800 Strong transcription Primary hematopoietic stem cells short term culture blood
28 chr1:150733200-150736200 Weak transcription Liver Liver
29 chr1:150733400-150735600 Weak transcription Duodenum Mucosa Duodenum
30 chr1:150733400-150735600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:150733400-150735600 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:150733400-150736400 Weak transcription Stomach Mucosa stomach
33 chr1:150733600-150735000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr1:150733800-150734800 ZNF genes & repeats GM12878-XiMat blood
35 chr1:150734000-150734800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:150734000-150737000 Weak transcription Fetal Intestine Small intestine
37 chr1:150734200-150736200 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr1:150734200-150736400 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
39 chr1:150734400-150734800 Enhancers Primary T cells from cord blood blood
40 chr1:150734400-150735200 Enhancers Primary T helper cells PMA-I stimulated --
41 chr1:150734400-150735800 Active TSS Primary hematopoietic stem cells blood
42 chr1:150734400-150736200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr1:150734400-150736200 Enhancers Primary T helper cells fromperipheralblood blood
44 chr1:150734400-150737000 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr1:150734600-150736200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr1:150734600-150736200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:150734600-150736200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:150734600-150736200 Active TSS Primary mononuclear cells fromperipheralblood Blood
49 chr1:150734600-150737000 Enhancers Primary T killer naive cells fromperipheralblood blood
50 chr1:150734600-150737200 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015