The 2.0 version of rSNPBase

Variant report

Variant rs4972475
Chromosome Location chr2:173153368-173153369
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173145400-173154400 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr2:173146400-173153600 Enhancers HSMMtube muscle
3 chr2:173146400-173154400 Enhancers HUVEC blood vessel
4 chr2:173147200-173153400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
5 chr2:173147200-173153600 Enhancers Fetal Muscle Leg muscle
6 chr2:173150200-173153400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:173150400-173158400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:173150400-173158400 Weak transcription Brain Substantia Nigra brain
9 chr2:173150600-173158200 Weak transcription Fetal Kidney kidney
10 chr2:173150800-173158600 Weak transcription Brain Hippocampus Middle brain
11 chr2:173151000-173158200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr2:173151400-173153600 Enhancers Skeletal Muscle Female skeletal muscle
13 chr2:173151400-173158600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr2:173151400-173168000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:173151600-173157400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr2:173152400-173153600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:173152400-173153600 Enhancers HSMM muscle
18 chr2:173152400-173153800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:173152600-173153400 Enhancers Adipose Nuclei Adipose
20 chr2:173152600-173153600 Enhancers Right Atrium heart
21 chr2:173152600-173153600 Enhancers Spleen Spleen
22 chr2:173152600-173153800 Enhancers Fetal Intestine Small intestine
23 chr2:173152800-173153400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:173152800-173153400 Enhancers Skeletal Muscle Male skeletal muscle
25 chr2:173152800-173153600 Enhancers Left Ventricle heart
26 chr2:173152800-173153600 Enhancers Ovary ovary
27 chr2:173152800-173153800 Enhancers Duodenum Mucosa Duodenum
28 chr2:173153000-173153600 Enhancers Primary T cells fromperipheralblood blood
29 chr2:173153000-173153600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr2:173153000-173153600 Enhancers Brain Anterior Caudate brain
31 chr2:173153000-173153600 Enhancers Stomach Mucosa stomach
32 chr2:173153000-173153600 Enhancers HMEC breast
33 chr2:173153000-173153800 Enhancers Primary hematopoietic stem cells short term culture blood
34 chr2:173153000-173153800 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr2:173153000-173153800 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr2:173153000-173153800 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr2:173153000-173154000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:173153000-173158800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr2:173153200-173153400 Enhancers Primary T helper cells fromperipheralblood blood
40 chr2:173153200-173153600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr2:173153200-173153600 Enhancers NHEK skin
42 chr2:173153200-173158600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015