Variant report

Variant	rs67694199
Chromosome Location	chr2:173150810-173150811
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:173143913..173145648-chr2:173149855..173151501,2	K562	blood:
2	chr2:173149753..173152104-chr2:173154943..173157647,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12471128	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4522573	0.82[EUR][1000 genomes]
rs4536625	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4588155	0.82[EUR][1000 genomes]
rs4972475	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62167402	0.82[EUR][1000 genomes]
rs7576759	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:173142800-173151000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr2:173143600-173151000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr2:173145400-173154400	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr2:173146200-173151000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr2:173146400-173151000	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr2:173146400-173151000	Enhancers	NHDF-Ad	bronchial
7	chr2:173146400-173152000	Enhancers	HSMM	muscle
8	chr2:173146400-173153600	Enhancers	HSMMtube	muscle
9	chr2:173146400-173154400	Enhancers	HUVEC	blood vessel
10	chr2:173147200-173151000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr2:173147200-173153400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr2:173147200-173153600	Enhancers	Fetal Muscle Leg	muscle
13	chr2:173147800-173152400	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr2:173147800-173153000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr2:173147800-173153000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr2:173148200-173151200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr2:173148400-173151200	Enhancers	Fetal Muscle Trunk	muscle
18	chr2:173148400-173151600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr2:173148800-173151000	Enhancers	Placenta	Placenta
20	chr2:173149000-173151000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr2:173149000-173151000	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr2:173149000-173151000	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr2:173149000-173151600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
24	chr2:173149000-173151800	Enhancers	Primary T helper cells PMA-I stimulated	--
25	chr2:173149200-173151000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr2:173149200-173151600	Enhancers	Primary T cells from cord blood	blood
27	chr2:173149400-173151000	Enhancers	H1 Cell Line	embryonic stem cell
28	chr2:173149400-173151000	Enhancers	Skeletal Muscle Female	skeletal muscle
29	chr2:173149400-173151600	Enhancers	Primary T helper cells fromperipheralblood	blood
30	chr2:173149600-173151400	Enhancers	Fetal Thymus	thymus
31	chr2:173149800-173151600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
32	chr2:173149800-173151600	Enhancers	Primary T killer memory cells from peripheral blood	blood
33	chr2:173149800-173151800	Enhancers	Primary T helper naive cells from peripheral blood	blood
34	chr2:173150000-173151000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
35	chr2:173150000-173151000	Enhancers	Thymus	Thymus
36	chr2:173150000-173151600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
37	chr2:173150000-173151800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
38	chr2:173150000-173153000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr2:173150200-173151000	Enhancers	Fetal Heart	heart
40	chr2:173150200-173151200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
41	chr2:173150200-173153200	Weak transcription	NHEK	skin
42	chr2:173150200-173153400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr2:173150400-173158400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr2:173150400-173158400	Weak transcription	Brain Substantia Nigra	brain
45	chr2:173150600-173151000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
46	chr2:173150600-173151200	Weak transcription	Sigmoid Colon	Sigmoid Colon
47	chr2:173150600-173151800	Weak transcription	NH-A	brain
48	chr2:173150600-173152800	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr2:173150600-173152800	Weak transcription	Duodenum Mucosa	Duodenum
50	chr2:173150600-173152800	Weak transcription	Left Ventricle	heart

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