The 2.0 version of rSNPBase

Variant report

Variant rs4973297
Chromosome Location chr2:231059993-231059994
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231028400-231067000 Strong transcription Primary B cells from peripheral blood blood
2 chr2:231031400-231061200 Strong transcription Primary B cells from cord blood blood
3 chr2:231035400-231077000 Weak transcription HepG2 liver
4 chr2:231035800-231062800 Weak transcription Muscle Satellite Cultured Cells --
5 chr2:231036800-231071800 Weak transcription NHEK skin
6 chr2:231036800-231073600 Weak transcription HMEC breast
7 chr2:231038000-231069600 Weak transcription NHLF lung
8 chr2:231041400-231064600 Weak transcription Osteobl bone
9 chr2:231042800-231062600 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:231043000-231062800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr2:231043800-231062600 Weak transcription Colon Smooth Muscle Colon
12 chr2:231044600-231062600 Weak transcription Psoas Muscle Psoas
13 chr2:231044800-231062600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:231044800-231062800 Weak transcription Pancreas Pancrea
15 chr2:231045200-231062800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:231046000-231062600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr2:231046200-231062600 Weak transcription Brain Cingulate Gyrus brain
18 chr2:231046200-231062800 Weak transcription Right Ventricle heart
19 chr2:231046200-231069800 Weak transcription HSMM muscle
20 chr2:231046400-231062400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr2:231047600-231062800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:231048000-231062600 Weak transcription Brain Hippocampus Middle brain
23 chr2:231048000-231062600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr2:231048000-231062800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr2:231048200-231062600 Weak transcription Small Intestine intestine
26 chr2:231048200-231062600 Weak transcription Stomach Smooth Muscle stomach
27 chr2:231048200-231062800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr2:231048200-231062800 Weak transcription Colonic Mucosa Colon
29 chr2:231048200-231062800 Weak transcription Gastric stomach
30 chr2:231048200-231062800 Weak transcription Rectal Smooth Muscle rectum
31 chr2:231048200-231062800 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr2:231048400-231062800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr2:231049200-231062800 Weak transcription Duodenum Mucosa Duodenum
34 chr2:231049200-231062800 Weak transcription Esophagus oesophagus
35 chr2:231049800-231062600 Weak transcription Placenta Placenta
36 chr2:231050000-231062600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr2:231050200-231065000 Weak transcription Brain Substantia Nigra brain
38 chr2:231050600-231062800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:231050800-231062600 Weak transcription Fetal Stomach stomach
40 chr2:231050800-231062600 Weak transcription Spleen Spleen
41 chr2:231051000-231062600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:231057600-231060400 Strong transcription Primary T cells fromperipheralblood blood
43 chr2:231057600-231060400 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:231057600-231061200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:231057800-231060200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:231057800-231061000 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr2:231058000-231060200 ZNF genes & repeats GM12878-XiMat blood
48 chr2:231058000-231060400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
49 chr2:231058200-231060200 Strong transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:231058200-231061200 Strong transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015