Variant report
| Variant | rs55945652 |
|---|---|
| Chromosome Location | chr2:231055764-231055765 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:231028400-231067000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 2 | chr2:231031400-231061200 | Strong transcription | Primary B cells from cord blood | blood |
| 3 | chr2:231035400-231077000 | Weak transcription | HepG2 | liver |
| 4 | chr2:231035800-231062800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 5 | chr2:231036800-231071800 | Weak transcription | NHEK | skin |
| 6 | chr2:231036800-231073600 | Weak transcription | HMEC | breast |
| 7 | chr2:231038000-231069600 | Weak transcription | NHLF | lung |
| 8 | chr2:231041400-231064600 | Weak transcription | Osteobl | bone |
| 9 | chr2:231042800-231058400 | Weak transcription | Brain Anterior Caudate | brain |
| 10 | chr2:231042800-231062600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 11 | chr2:231043000-231062800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 12 | chr2:231043800-231057800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr2:231043800-231062600 | Weak transcription | Colon Smooth Muscle | Colon |
| 14 | chr2:231044600-231062600 | Weak transcription | Psoas Muscle | Psoas |
| 15 | chr2:231044800-231062600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 16 | chr2:231044800-231062800 | Weak transcription | Pancreas | Pancrea |
| 17 | chr2:231045000-231057600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 18 | chr2:231045200-231062800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 19 | chr2:231046000-231062600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 20 | chr2:231046200-231062600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr2:231046200-231062800 | Weak transcription | Right Ventricle | heart |
| 22 | chr2:231046200-231069800 | Weak transcription | HSMM | muscle |
| 23 | chr2:231046400-231062400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 24 | chr2:231047600-231062800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 25 | chr2:231048000-231062600 | Weak transcription | Brain Hippocampus Middle | brain |
| 26 | chr2:231048000-231062600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 27 | chr2:231048000-231062800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 28 | chr2:231048200-231057600 | Weak transcription | Fetal Lung | lung |
| 29 | chr2:231048200-231058200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 30 | chr2:231048200-231062600 | Weak transcription | Small Intestine | intestine |
| 31 | chr2:231048200-231062600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 32 | chr2:231048200-231062800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 33 | chr2:231048200-231062800 | Weak transcription | Colonic Mucosa | Colon |
| 34 | chr2:231048200-231062800 | Weak transcription | Gastric | stomach |
| 35 | chr2:231048200-231062800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 36 | chr2:231048200-231062800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr2:231048400-231062800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr2:231048800-231059400 | Weak transcription | Lung | lung |
| 39 | chr2:231049000-231059600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 40 | chr2:231049200-231058400 | Weak transcription | Aorta | Aorta |
| 41 | chr2:231049200-231062800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 42 | chr2:231049200-231062800 | Weak transcription | Esophagus | oesophagus |
| 43 | chr2:231049800-231056400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 44 | chr2:231049800-231062600 | Weak transcription | Placenta | Placenta |
| 45 | chr2:231050000-231057800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 46 | chr2:231050000-231062600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 47 | chr2:231050200-231065000 | Weak transcription | Brain Substantia Nigra | brain |
| 48 | chr2:231050400-231058400 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 49 | chr2:231050400-231058600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 50 | chr2:231050600-231058600 | Weak transcription | Adipose Nuclei | Adipose |
