Variant report
Variant | rs4974583 |
---|---|
Chromosome Location | chr4:1280481-1280482 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:8)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:8 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr4:1279366..1281863-chr4:1281921..1284803,4 | MCF-7 | breast: | |
2 | chr4:1238004..1246805-chr4:1279798..1288475,25 | K562 | blood: | |
3 | chr4:1238004..1248980-chr4:1275065..1286840,30 | K562 | blood: | |
4 | chr4:1242091..1248517-chr4:1279714..1285424,16 | MCF-7 | breast: | |
5 | chr4:1277701..1281340-chr4:1281394..1284175,9 | K562 | blood: | |
6 | chr4:1236833..1250005-chr4:1276188..1292579,54 | MCF-7 | breast: | |
7 | chr4:1076538..1078176-chr4:1278229..1280499,2 | MCF-7 | breast: | |
8 | chr4:1266374..1269150-chr4:1278693..1281595,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000159692 | Chromatin interaction |
ENSG00000090316 | Chromatin interaction |
ENSG00000196810 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11247980 | 0.81[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs11247985 | 0.86[AMR][1000 genomes] |
rs11247990 | 0.83[AMR][1000 genomes] |
rs11729031 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs11729033 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs11931251 | 0.80[AFR][1000 genomes] |
rs11936387 | 0.82[ASN][1000 genomes] |
rs11939426 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs12503555 | 0.82[ASN][1000 genomes] |
rs12508297 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs1316487 | 0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs1344300 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1344301 | 0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1680081 | 0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17164589 | 0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs17164638 | 0.83[AMR][1000 genomes] |
rs2141653 | 0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2178441 | 0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2178442 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2293632 | 0.82[ASN][1000 genomes] |
rs35317148 | 0.94[ASN][1000 genomes] |
rs35317516 | 0.83[AMR][1000 genomes] |
rs35385487 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs36051935 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4399931 | 0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4974547 | 0.81[ASN][1000 genomes] |
rs4974579 | 0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs4974585 | 0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4974586 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4974587 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4974588 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4974589 | 0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4974590 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4974592 | 0.81[ASN][1000 genomes] |
rs4974593 | 0.81[ASN][1000 genomes] |
rs4974597 | 0.86[AMR][1000 genomes] |
rs55875205 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55955526 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs56085572 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs56240712 | 0.86[AMR][1000 genomes] |
rs56404604 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs56758128 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs56887292 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs57415102 | 0.83[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs58058346 | 0.86[AMR][1000 genomes] |
rs58572555 | 0.86[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs58847530 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs59944614 | 0.85[AMR][1000 genomes] |
rs60133030 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs60555464 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs60640478 | 0.81[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs60897436 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs61359788 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs61367508 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6599296 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6599297 | 0.82[ASN][1000 genomes] |
rs6599299 | 0.83[AMR][1000 genomes] |
rs66879211 | 0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6814328 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs6815464 | 0.81[ASN][1000 genomes] |
rs6819243 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6829118 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6837701 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs6852991 | 0.82[ASN][1000 genomes] |
rs72501964 | 0.81[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs72501965 | 0.82[ASN][1000 genomes] |
rs73069965 | 0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069970 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069973 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs73069974 | 0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069976 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069979 | 0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069980 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069981 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73069982 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs73069985 | 0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs73069986 | 0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73069988 | 0.85[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73069998 | 0.85[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73069999 | 0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73071923 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73071929 | 0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73071932 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73071934 | 0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73071935 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs73072001 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs73073703 | 0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs73795288 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73796044 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73796048 | 0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73796053 | 0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs73796055 | 0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs73796057 | 0.86[AMR][1000 genomes] |
rs73796058 | 0.86[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs73796059 | 0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs7666876 | 0.86[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs7671585 | 0.86[AMR][1000 genomes] |
rs7696746 | 0.81[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv822425 | chr4:540105-1413799 | Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 108 gene(s) | inside rSNPs | diseases |
2 | nsv530490 | chr4:614355-1399150 | Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 104 gene(s) | inside rSNPs | diseases |
3 | esv3339080 | chr4:970630-1546223 | Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 82 gene(s) | inside rSNPs | diseases |
4 | nsv829835 | chr4:1097586-1304239 | Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 59 gene(s) | inside rSNPs | diseases |
5 | nsv878328 | chr4:1141573-1990425 | Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 121 gene(s) | inside rSNPs | diseases |
6 | nsv878330 | chr4:1147407-1523930 | Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 71 gene(s) | inside rSNPs | diseases |
7 | nsv461152 | chr4:1159680-1415698 | Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 70 gene(s) | inside rSNPs | diseases |
8 | nsv593278 | chr4:1159680-1415698 | Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 70 gene(s) | inside rSNPs | diseases |
9 | nsv997971 | chr4:1191256-1518521 | Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 67 gene(s) | inside rSNPs | diseases |
10 | nsv461155 | chr4:1203265-1352685 | Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 66 gene(s) | inside rSNPs | diseases |
11 | nsv593281 | chr4:1203265-1352685 | Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 66 gene(s) | inside rSNPs | diseases |
12 | nsv1002097 | chr4:1212573-1320086 | Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
13 | nsv536986 | chr4:1212573-1320086 | Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
14 | esv1811773 | chr4:1228251-1287474 | ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
15 | esv1800629 | chr4:1228451-1287274 | Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
16 | esv1812851 | chr4:1228451-1287274 | Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
17 | esv1823612 | chr4:1228451-1287274 | Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
18 | esv1825633 | chr4:1228451-1287274 | Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
19 | nsv593298 | chr4:1244267-1342521 | Flanking Active TSS Strong transcription Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 36 gene(s) | inside rSNPs | diseases |
20 | nsv461156 | chr4:1254930-1312394 | Strong transcription Flanking Active TSS Genic enhancers Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
21 | nsv593299 | chr4:1254930-1312394 | Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
22 | esv1798897 | chr4:1265740-1287474 | Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 15 gene(s) | inside rSNPs | diseases |
23 | esv1833294 | chr4:1265740-1287474 | Active TSS Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 15 gene(s) | inside rSNPs | diseases |
24 | esv1829934 | chr4:1265940-1287274 | Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 15 gene(s) | inside rSNPs | diseases |
25 | nsv593300 | chr4:1272664-1312394 | Genic enhancers Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
26 | nsv878338 | chr4:1277826-1358449 | Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
27 | nsv878339 | chr4:1277826-1363886 | Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 35 gene(s) | inside rSNPs | diseases |
28 | nsv878340 | chr4:1277826-1386570 | Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 36 gene(s) | inside rSNPs | diseases |
29 | nsv878341 | chr4:1277826-1391400 | Active TSS ZNF genes & repeats Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 37 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:1245400-1282400 | Weak transcription | Brain Angular Gyrus | brain |
2 | chr4:1245800-1282600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
3 | chr4:1245800-1282600 | Weak transcription | Right Ventricle | heart |
4 | chr4:1246000-1282600 | Weak transcription | Stomach Smooth Muscle | stomach |
5 | chr4:1254800-1282400 | Weak transcription | Pancreas | Pancrea |
6 | chr4:1259400-1283000 | Weak transcription | Ovary | ovary |
7 | chr4:1263400-1282600 | Weak transcription | Brain Hippocampus Middle | brain |
8 | chr4:1263800-1282800 | Weak transcription | Brain Anterior Caudate | brain |
9 | chr4:1267800-1282400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
10 | chr4:1270600-1282400 | Weak transcription | Lung | lung |
11 | chr4:1278800-1281000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
12 | chr4:1279600-1280600 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
13 | chr4:1280000-1280600 | ZNF genes & repeats | Fetal Intestine Small | intestine |
14 | chr4:1280200-1282400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
15 | chr4:1280400-1282400 | Weak transcription | Spleen | Spleen |
16 | chr4:1280400-1282600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
17 | chr4:1280400-1282800 | Weak transcription | Brain Cingulate Gyrus | brain |