Variant report

Variant	rs7671585
Chromosome Location	chr4:1299206-1299207
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:30)
CpG islands
(count:61)
Chromatin interactive
region (count:6)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:30 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOXA1	chr4:1298955-1299449	HepG2	liver:	n/a	n/a
2	FOSL2	chr4:1298989-1299510	HepG2	liver:	n/a	n/a
3	FOS	chr4:1299169-1299476	MCF10A-Er-Src	breast:	n/a	n/a
4	FOSL1	chr4:1298902-1300342	HCT-116	colon:	n/a	n/a
5	MBD4	chr4:1299021-1299409	HepG2	liver:	n/a	n/a
6	FOS	chr4:1299176-1299472	MCF10A-Er-Src	breast:	n/a	n/a
7	NFIC	chr4:1299004-1299363	HepG2	liver:	n/a	n/a
8	FOS	chr4:1299144-1299483	MCF10A-Er-Src	breast:	n/a	n/a
9	RCOR1	chr4:1299169-1299256	HepG2	liver:	n/a	n/a
10	MAFK	chr4:1299133-1299696	HepG2	liver:	n/a	chr4:1299308-1299323
11	JUND	chr4:1299161-1299424	HepG2	liver:	n/a	chr4:1299313-1299324
12	MYBL2	chr4:1298952-1299480	HepG2	liver:	n/a	n/a
13	FOXA1	chr4:1298985-1299451	HepG2	liver:	n/a	n/a
14	ARID3A	chr4:1299139-1299262	HepG2	liver:	n/a	n/a
15	TEAD4	chr4:1299003-1299469	HepG2	liver:	n/a	n/a
16	HDAC2	chr4:1299047-1299382	HepG2	liver:	n/a	n/a
17	FOXA1	chr4:1298969-1299403	HepG2	liver:	n/a	n/a
18	MAFF	chr4:1299142-1299431	HepG2	liver:	n/a	chr4:1299306-1299324
19	FOXA1	chr4:1299006-1299486	HepG2	liver:	n/a	n/a
20	FOSL2	chr4:1299027-1299512	HepG2	liver:	n/a	n/a
21	POLR2A	chr4:1298949-1299765	GM12892	blood:	n/a	n/a
22	POLR2A	chr4:1299038-1299522	HCT-116	colon:	n/a	n/a
23	FOS	chr4:1299138-1299487	MCF10A-Er-Src	breast:	n/a	n/a
24	JUND	chr4:1298851-1300376	HCT-116	colon:	n/a	chr4:1300048-1300059 chr4:1299313-1299324
25	MXI1	chr4:1299044-1299370	HepG2	liver:	n/a	n/a
26	BHLHE40	chr4:1298976-1299309	HepG2	liver:	n/a	n/a
27	MAFK	chr4:1299164-1299411	HepG2	liver:	n/a	chr4:1299308-1299323
28	FOXA2	chr4:1299068-1299317	HepG2	liver:	n/a	n/a
29	POLR2A	chr4:1298954-1299252	K562	blood:	n/a	n/a
30	EP300	chr4:1299200-1299455	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:1299191-1299241	HEEpiC	esophagus:	n/a
2	chr4:1299191-1299241	SK-N-SH_RA	brain:	n/a
3	chr4:1299191-1299241	AG09309	skin:	n/a
4	chr4:1299191-1299241	HRE	kidney:	n/a
5	chr4:1299191-1299241	GM19239	blood:	n/a
6	chr4:1299191-1299241	BJ	skin:	n/a
7	chr4:1299191-1299241	PrEC	prostate:	n/a
8	chr4:1299191-1299241	ovcar-3	ovarian:	n/a
9	chr4:1299191-1299241	HIPEpiC	eye:	n/a
10	chr4:1299191-1299241	HCM	heart:	n/a
11	chr4:1299191-1299241	HL-60	blood:	n/a
12	chr4:1299191-1299241	HRCEpiC	kidney:	n/a
13	chr4:1299191-1299241	HPAEpiC	pulmonary alveolar:	n/a
14	chr4:1299191-1299241	GM12892	blood:	n/a
15	chr4:1299191-1299241	Jurkat	blood:	n/a
16	chr4:1299191-1299241	HAEpiC	amniotic membrane:	n/a
17	chr4:1299191-1299241	SAEC	small airway:	n/a
18	chr4:1299191-1299241	ProgFib	skin:	n/a
19	chr4:1299191-1299241	NHBE	bronchial:	n/a
20	chr4:1299191-1299241	Caco-2	colon:	n/a
21	chr4:1299191-1299241	H1-hESC	embryonic stem cell:	embryo
22	chr4:1299191-1299241	IMR90	lung:	fetal
23	chr4:1299191-1299241	PFSK-1	brain:	n/a
24	chr4:1299191-1299241	HepG2	liver:	n/a
25	chr4:1299191-1299241	HMEC	breast:	n/a
26	chr4:1299191-1299241	HRPEpiC	eye:	n/a
27	chr4:1299191-1299241	Hela-S3	cervix:	n/a
28	chr4:1299191-1299241	HCF	heart:	n/a
29	chr4:1299191-1299241	MCF-7	breast:	n/a
30	chr4:1299191-1299241	NB4	blood:	n/a
31	chr4:1299191-1299241	MCF10A-Er-Src	breast:	n/a
32	chr4:1299191-1299241	AoSMC	blood vessel:	n/a
33	chr4:1299191-1299241	SK-N-SH	brain:	n/a
34	chr4:1299191-1299241	AG10803	skin:	n/a
35	chr4:1299191-1299241	NHDF-neo	bronchial:	n/a
36	chr4:1299191-1299241	ECC-1	luminal epithelium:	n/a
37	chr4:1299191-1299241	BE2_C	brain:	n/a
38	chr4:1299191-1299241	HUVEC	blood vessel:	n/a
39	chr4:1299191-1299241	GM12891	blood:	n/a
40	chr4:1299191-1299241	HCT-116	colon:	n/a
41	chr4:1299191-1299241	SK-N-MC	brain:	n/a
42	chr4:1299191-1299241	LNCaP	prostate:	n/a
43	chr4:1299191-1299241	NH-A	brain:	n/a
44	chr4:1299191-1299241	PANC-1	pancreas:	n/a
45	chr4:1299191-1299241	A549	lung:	n/a
46	chr4:1299191-1299241	Hepatocyte	liver:	n/a
47	chr4:1299191-1299241	AG04450	lung:	fetal
48	chr4:1299191-1299241	AG04449	skin:	fetal
49	chr4:1299191-1299241	RPTEC	kidney:	n/a
50	chr4:1299191-1299241	GM12878	blood:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:1236665..1239012-chr4:1297497..1299590,2	K562	blood:
2	chr4:1297579..1299437-chr4:1336278..1338456,2	MCF-7	breast:
3	chr4:1297989..1299587-chr4:1301090..1302609,2	K562	blood:
4	chr4:1298051..1300752-chr4:1304629..1306876,2	MCF-7	breast:
5	chr4:1232098..1233809-chr4:1299016..1301525,2	K562	blood:
6	chr4:1240987..1244613-chr4:1297662..1300562,3	MCF-7	breast:

No data

Variant related genes	Relation type
MAEA	TF binding region
MAEA	CpG island
ENSG00000159692	Chromatin interaction
ENSG00000196810	Chromatin interaction

Extended variants
information (count: 127 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:101)

rs_ID	r²[population]
rs11247985	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11247988	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11247989	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11247990	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11247991	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11729031	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11729033	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11931251	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11936387	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11939426	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12503555	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12508297	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1316487	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1344300	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs1344301	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs1680081	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs17164620	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17164638	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2141653	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs2178441	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs2178442	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs2272481	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2293632	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35317516	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35385487	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs36051935	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs4399931	0.92[AMR][1000 genomes]
rs4974547	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4974583	0.86[AMR][1000 genomes]
rs4974585	0.92[AMR][1000 genomes]
rs4974586	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs4974587	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs4974588	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs4974589	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs4974590	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs4974592	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4974593	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4974595	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4974597	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55875205	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs55955526	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56085572	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56240712	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56404604	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56758128	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56887292	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57415102	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58058346	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58572555	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58847530	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59944614	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60133030	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60555464	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60640478	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60897436	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61359788	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61367508	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6599296	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6599297	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6599299	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6599300	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66879211	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6814328	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6815464	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6819243	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6829118	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6837701	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6852991	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72501965	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73069965	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069970	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069973	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069974	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069976	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069979	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069980	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069981	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73069982	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs73069985	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs73069986	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73069988	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73069998	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73069999	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73071923	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73071929	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73071932	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73071934	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73071935	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73072001	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73073703	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73795288	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73796044	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73796048	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs73796053	0.90[AMR][1000 genomes]
rs73796055	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73796057	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73796058	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73796059	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7666876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7672093	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7696746	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv3339080	chr4:970630-1546223	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv829835	chr4:1097586-1304239	Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
5	nsv878328	chr4:1141573-1990425	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
6	nsv878330	chr4:1147407-1523930	Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
7	nsv461152	chr4:1159680-1415698	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
8	nsv593278	chr4:1159680-1415698	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
9	nsv997971	chr4:1191256-1518521	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
10	nsv461155	chr4:1203265-1352685	Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
11	nsv593281	chr4:1203265-1352685	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
12	nsv1002097	chr4:1212573-1320086	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
13	nsv536986	chr4:1212573-1320086	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
14	nsv593298	chr4:1244267-1342521	Flanking Active TSS Strong transcription Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
15	nsv461156	chr4:1254930-1312394	Strong transcription Flanking Active TSS Genic enhancers Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
16	nsv593299	chr4:1254930-1312394	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
17	nsv593300	chr4:1272664-1312394	Genic enhancers Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
18	nsv878338	chr4:1277826-1358449	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
19	nsv878339	chr4:1277826-1363886	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
20	nsv878340	chr4:1277826-1386570	Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
21	nsv878341	chr4:1277826-1391400	Active TSS ZNF genes & repeats Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
22	nsv1002635	chr4:1282603-1402761	Genic enhancers Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
23	nsv878342	chr4:1291337-1363886	Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
24	nsv878343	chr4:1291337-1391400	Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
25	nsv878344	chr4:1291337-1414684	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
26	nsv878345	chr4:1291337-1563920	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1285200-1303400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:1285400-1302400	Weak transcription	Fetal Kidney	kidney
3	chr4:1285800-1302200	Weak transcription	NHDF-Ad	bronchial
4	chr4:1286200-1302400	Weak transcription	Fetal Brain Male	brain
5	chr4:1289400-1299400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr4:1289400-1299400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr4:1289400-1299800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr4:1289400-1302200	Weak transcription	Fetal Heart	heart
9	chr4:1290000-1302400	Strong transcription	Fetal Stomach	stomach
10	chr4:1290400-1301200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:1290400-1302200	Weak transcription	Right Atrium	heart
12	chr4:1290800-1302600	Weak transcription	Colon Smooth Muscle	Colon
13	chr4:1292000-1302200	Weak transcription	Fetal Lung	lung
14	chr4:1292000-1302600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr4:1292000-1302600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr4:1292000-1303400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr4:1292600-1302200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr4:1293200-1312000	Weak transcription	Hela-S3	cervix
19	chr4:1293600-1301800	Weak transcription	Brain Anterior Caudate	brain
20	chr4:1293800-1302200	Weak transcription	Brain Cingulate Gyrus	brain
21	chr4:1293800-1303400	Weak transcription	Aorta	Aorta
22	chr4:1294200-1302000	Weak transcription	Osteobl	bone
23	chr4:1294400-1299400	Weak transcription	Ovary	ovary
24	chr4:1294400-1301800	Weak transcription	Rectal Smooth Muscle	rectum
25	chr4:1294400-1302200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr4:1294400-1302600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr4:1294600-1300600	Weak transcription	Psoas Muscle	Psoas
28	chr4:1294600-1301000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr4:1294800-1300000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
30	chr4:1294800-1302000	Weak transcription	Brain Angular Gyrus	brain
31	chr4:1294800-1302200	Weak transcription	Brain Inferior Temporal Lobe	brain
32	chr4:1294800-1302200	Weak transcription	Brain Substantia Nigra	brain
33	chr4:1295000-1301400	Weak transcription	NHLF	lung
34	chr4:1295000-1302000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
35	chr4:1295000-1302400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
36	chr4:1295000-1302600	Weak transcription	Duodenum Smooth Muscle	Duodenum
37	chr4:1295200-1299800	Weak transcription	HUES6 Cell Line	embryonic stem cell
38	chr4:1295200-1301800	Weak transcription	Left Ventricle	heart
39	chr4:1295200-1302000	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr4:1295200-1302600	Weak transcription	Brain Germinal Matrix	brain
41	chr4:1295200-1303400	Weak transcription	H9 Cell Line	embryonic stem cell
42	chr4:1295200-1303400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
43	chr4:1295400-1299800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
44	chr4:1295400-1300400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr4:1295400-1302800	Weak transcription	HUES64 Cell Line	embryonic stem cell
46	chr4:1295400-1302800	Weak transcription	NH-A	brain
47	chr4:1295600-1302000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr4:1295600-1302000	Weak transcription	Skeletal Muscle Female	skeletal muscle
49	chr4:1295600-1302200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
50	chr4:1295800-1301800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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