Variant report

Variant rs6599297
Chromosome Location chr4:1295571-1295572
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1285200-1303400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr4:1285400-1302400 Weak transcription Fetal Kidney kidney
3 chr4:1285800-1296000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr4:1285800-1302200 Weak transcription NHDF-Ad bronchial
5 chr4:1286200-1299200 Strong transcription Fetal Intestine Small intestine
6 chr4:1286200-1302400 Weak transcription Fetal Brain Male brain
7 chr4:1286400-1299000 Weak transcription Small Intestine intestine
8 chr4:1289000-1296000 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr4:1289000-1298800 Weak transcription Stomach Mucosa stomach
10 chr4:1289400-1298800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr4:1289400-1299000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr4:1289400-1299400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr4:1289400-1299400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr4:1289400-1299800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr4:1289400-1302200 Weak transcription Fetal Heart heart
16 chr4:1290000-1302400 Strong transcription Fetal Stomach stomach
17 chr4:1290200-1295600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:1290200-1296200 Strong transcription Primary B cells from peripheral blood blood
19 chr4:1290400-1301200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr4:1290400-1302200 Weak transcription Right Atrium heart
21 chr4:1290600-1296400 Strong transcription Cortex derived primary cultured neurospheres brain
22 chr4:1290800-1296200 Strong transcription K562 blood
23 chr4:1290800-1302600 Weak transcription Colon Smooth Muscle Colon
24 chr4:1291200-1296800 Strong transcription Fetal Thymus thymus
25 chr4:1291800-1299000 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr4:1291800-1299200 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr4:1292000-1295800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr4:1292000-1302200 Weak transcription Fetal Lung lung
29 chr4:1292000-1302600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr4:1292000-1302600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr4:1292000-1303400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr4:1292400-1296000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr4:1292600-1295600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr4:1292600-1302200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr4:1293200-1295600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:1293200-1312000 Weak transcription Hela-S3 cervix
37 chr4:1293400-1295600 Strong transcription Fetal Muscle Trunk muscle
38 chr4:1293400-1296200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr4:1293600-1301800 Weak transcription Brain Anterior Caudate brain
40 chr4:1293800-1296400 Genic enhancers Primary B cells from cord blood blood
41 chr4:1293800-1299000 Weak transcription Placenta Amnion Placenta Amnion
42 chr4:1293800-1302200 Weak transcription Brain Cingulate Gyrus brain
43 chr4:1293800-1303400 Weak transcription Aorta Aorta
44 chr4:1294000-1296400 Enhancers Primary monocytes fromperipheralblood blood
45 chr4:1294000-1298600 Weak transcription HepG2 liver
46 chr4:1294000-1299200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr4:1294200-1295600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:1294200-1295600 Enhancers Skeletal Muscle Female skeletal muscle
49 chr4:1294200-1295800 Enhancers HSMMtube muscle
50 chr4:1294200-1296000 Strong transcription HUVEC blood vessel

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