The 2.0 version of rSNPBase

Variant report

Variant rs499579
Chromosome Location chr1:85435400-85435401
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85416200-85435400 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:85431400-85435400 Weak transcription Primary B cells from peripheral blood blood
3 chr1:85431400-85437600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:85434400-85436600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr1:85434600-85435400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:85434600-85435600 Enhancers Rectal Mucosa Donor 31 rectum
7 chr1:85434600-85437400 Weak transcription Fetal Intestine Large intestine
8 chr1:85434600-85437400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:85434600-85437800 Weak transcription Fetal Intestine Small intestine
10 chr1:85434800-85436400 Enhancers Placenta Placenta
11 chr1:85435000-85435600 Enhancers GM12878-XiMat blood
12 chr1:85435200-85440400 Enhancers Primary T helper 17 cells PMA-I stimulated --
13 chr1:85435400-85435600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr1:85435400-85435800 Enhancers Primary B cells from peripheral blood blood
15 chr1:85435400-85436000 Enhancers Primary T cells fromperipheralblood blood
16 chr1:85435400-85437600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015