The 2.0 version of rSNPBase

Variant report

Variant rs589227
Chromosome Location chr1:85439228-85439229
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85435200-85440400 Enhancers Primary T helper 17 cells PMA-I stimulated --
2 chr1:85437400-85441200 Enhancers Primary B cells from peripheral blood blood
3 chr1:85437400-85441200 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr1:85437600-85441200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr1:85437800-85439600 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr1:85437800-85439600 Enhancers NHDF-Ad bronchial
7 chr1:85437800-85440000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr1:85438000-85439600 Enhancers Osteobl bone
9 chr1:85438000-85440200 Enhancers Primary T helper cells PMA-I stimulated --
10 chr1:85438400-85439600 Enhancers Primary T cells fromperipheralblood blood
11 chr1:85438400-85439800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:85438600-85439600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:85438600-85439800 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:85438600-85440600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:85438600-85441000 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr1:85438800-85440000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:85438800-85440400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:85438800-85441200 Transcr. at gene 5' and 3' GM12878-XiMat blood
19 chr1:85439000-85439600 Enhancers Monocytes-CD14+_RO01746 blood
20 chr1:85439200-85439600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015