The 2.0 version of rSNPBase

Variant report

Variant rs4995986
Chromosome Location chr3:17192637-17192638
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17179400-17193000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:17181200-17193200 Weak transcription Primary B cells from cord blood blood
3 chr3:17182400-17194400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr3:17183000-17193000 Weak transcription Aorta Aorta
5 chr3:17183000-17198800 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:17183400-17194800 Weak transcription Left Ventricle heart
7 chr3:17183600-17193200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:17183600-17196400 Weak transcription Fetal Heart heart
9 chr3:17185800-17194600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr3:17186000-17193000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr3:17186000-17195200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr3:17186600-17195200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr3:17189600-17193400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr3:17190200-17194600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:17190800-17194000 Weak transcription Fetal Muscle Trunk muscle
16 chr3:17190800-17194800 Weak transcription Gastric stomach
17 chr3:17191000-17193200 Weak transcription Thymus Thymus
18 chr3:17191000-17193400 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr3:17191400-17217600 Weak transcription Small Intestine intestine
20 chr3:17191600-17193400 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr3:17191600-17194000 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr3:17191600-17194600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr3:17191800-17193000 Enhancers Primary T helper cells PMA-I stimulated --
24 chr3:17191800-17193000 Enhancers Dnd41 blood
25 chr3:17191800-17193200 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr3:17191800-17194600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr3:17192000-17193000 Enhancers GM12878-XiMat blood
28 chr3:17192000-17193200 Enhancers Primary T cells fromperipheralblood blood
29 chr3:17192000-17193200 Enhancers Primary T helper cells fromperipheralblood blood
30 chr3:17192000-17193400 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr3:17192000-17195000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr3:17192000-17196000 ZNF genes & repeats Fetal Stomach stomach
33 chr3:17192000-17196400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
34 chr3:17192000-17196400 ZNF genes & repeats Fetal Muscle Leg muscle
35 chr3:17192200-17193000 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr3:17192200-17193000 Weak transcription Duodenum Mucosa Duodenum
37 chr3:17192200-17193400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr3:17192200-17194400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr3:17192200-17194600 Weak transcription Fetal Lung lung
40 chr3:17192200-17194800 Weak transcription Rectal Smooth Muscle rectum
41 chr3:17192200-17211400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr3:17192400-17193200 Enhancers Primary T cells from cord blood blood
43 chr3:17192600-17193200 Enhancers Primary T helper naive cells fromperipheralblood blood
44 chr3:17192600-17193400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr3:17192600-17193400 Weak transcription Fetal Intestine Large intestine
46 chr3:17192600-17194400 Weak transcription Fetal Kidney kidney
47 chr3:17192600-17194600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr3:17192600-17194800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015