Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:125293777..125295394-chr8:125298930..125301060,2	K562	blood:
2	chr8:125044133..125046582-chr8:125300825..125303679,2	MCF-7	breast:
3	chr8:125295764..125298330-chr8:125298821..125301966,3	MCF-7	breast:
4	chr8:125248477..125251319-chr8:125300046..125301860,2	K562	blood:
5	chr8:125300574..125303512-chr8:125308098..125310912,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10088435	0.87[EUR][1000 genomes]
rs10089507	1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.92[YRI][hapmap];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10092974	1.00[CEU][hapmap];0.96[CHB][hapmap];0.86[JPT][hapmap];0.92[YRI][hapmap];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10102946	0.96[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap]
rs10111526	0.88[CEU][hapmap]
rs10217100	0.96[CEU][hapmap];0.96[CHB][hapmap];0.87[JPT][hapmap]
rs11786409	0.96[CEU][hapmap];0.95[CHB][hapmap];0.82[JPT][hapmap]
rs11994409	0.80[EUR][1000 genomes]
rs11997400	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11998018	0.96[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4076119	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs4131904	0.96[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap]
rs4351403	0.96[CEU][hapmap];0.96[CHB][hapmap];0.87[JPT][hapmap]
rs4464954	0.96[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4592013	0.96[CEU][hapmap];0.95[CHB][hapmap]
rs4625016	0.89[EUR][1000 genomes]
rs4870894	0.92[CEU][hapmap]
rs6980763	0.96[CEU][hapmap]
rs6986235	0.92[CEU][hapmap];0.96[CHB][hapmap];0.86[JPT][hapmap]
rs7004771	0.96[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762769	chr8:125167256-125480574	Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125295600-125306800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:125299800-125301600	Enhancers	K562	blood
3	chr8:125300600-125304400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr8:125300800-125301600	Enhancers	Fetal Heart	heart
5	chr8:125300800-125304400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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