Variant report

Variant	rs507158
Chromosome Location	chr8:60936515-60936516
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs2037561	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2622526	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2688656	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2688659	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs472799	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs475714	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs488934	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs490409	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs493713	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs497312	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs510005	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs519500	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs522182	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs526249	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs533776	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs544344	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs544416	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs548902	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs549730	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs574368	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs574929	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs594035	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs595819	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs598457	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs606131	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs627807	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs642072	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs648946	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs659506	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs666087	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs668563	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs671655	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs700726	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7845735	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60933200-60938000	Weak transcription	Primary B cells from peripheral blood	blood

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