Variant report

Variant rs528050556
Chromosome Location chr9:536813-536814
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:528000-537400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr9:530800-538400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr9:531200-538000 Enhancers Brain Anterior Caudate brain
4 chr9:531400-546400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr9:532000-538600 Enhancers Fetal Muscle Leg muscle
6 chr9:532400-538400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr9:532800-538400 Enhancers Cortex derived primary cultured neurospheres brain
8 chr9:533200-537000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr9:533400-537000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr9:533400-540000 Weak transcription A549 lung
11 chr9:534400-537000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr9:534800-546200 Weak transcription Fetal Kidney kidney
13 chr9:535000-537800 Enhancers Left Ventricle heart
14 chr9:535400-537200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr9:535400-538400 Weak transcription Stomach Mucosa stomach
16 chr9:535400-544600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr9:535400-546200 Weak transcription Esophagus oesophagus
18 chr9:535400-546600 Weak transcription Fetal Intestine Small intestine
19 chr9:535400-549200 Weak transcription Lung lung
20 chr9:535600-537200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr9:535600-537200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:535600-538600 Enhancers Fetal Heart heart
23 chr9:535600-539400 Weak transcription Fetal Intestine Large intestine
24 chr9:535600-546000 Weak transcription Duodenum Mucosa Duodenum
25 chr9:535600-546400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr9:535600-546600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr9:535800-537000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr9:535800-537000 Weak transcription Brain Cingulate Gyrus brain
29 chr9:535800-537000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr9:535800-537000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr9:535800-537200 Weak transcription Brain Angular Gyrus brain
32 chr9:535800-537200 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr9:535800-544400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr9:535800-544600 Weak transcription Pancreas Pancrea
35 chr9:535800-546400 Weak transcription H1 Cell Line embryonic stem cell
36 chr9:535800-546600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr9:536000-537000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr9:536000-537000 Weak transcription HMEC breast
39 chr9:536000-537600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr9:536000-545400 Weak transcription Stomach Smooth Muscle stomach
41 chr9:536400-537600 Enhancers Brain Substantia Nigra brain
42 chr9:536400-537800 Enhancers Primary B cells from peripheral blood blood
43 chr9:536600-537000 Enhancers Fetal Muscle Trunk muscle
44 chr9:536600-537000 Enhancers NHEK skin
45 chr9:536600-537800 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr9:536600-538000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr9:536600-538200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr9:536600-538400 Enhancers Brain Hippocampus Middle brain
49 chr9:536800-537000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr9:536800-537000 Enhancers Placenta Placenta

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