Variant report

Variant rs534830087
Chromosome Location chr4:10174189-10174190
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:10166000-10175400 Weak transcription Pancreas Pancrea
2 chr4:10167200-10174400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr4:10170200-10174200 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr4:10171400-10175600 Enhancers Fetal Heart heart
5 chr4:10171600-10176400 Flanking Active TSS K562 blood
6 chr4:10172400-10174200 Weak transcription Colon Smooth Muscle Colon
7 chr4:10172400-10174800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr4:10172400-10175400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr4:10172400-10176400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr4:10172400-10176600 Enhancers HMEC breast
11 chr4:10172600-10174800 Enhancers Fetal Intestine Small intestine
12 chr4:10172600-10176400 Enhancers Duodenum Mucosa Duodenum
13 chr4:10172600-10176400 Enhancers NHEK skin
14 chr4:10172800-10178400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr4:10173200-10174400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr4:10173400-10174400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr4:10173400-10175600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr4:10173400-10176400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr4:10173600-10174200 Enhancers H1 Cell Line embryonic stem cell
20 chr4:10173600-10175800 Enhancers Cortex derived primary cultured neurospheres brain
21 chr4:10173600-10175800 Enhancers HUVEC blood vessel
22 chr4:10173600-10176400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr4:10173600-10178000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr4:10173800-10174200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
25 chr4:10173800-10174200 Enhancers Colonic Mucosa Colon
26 chr4:10173800-10174400 Enhancers Fetal Muscle Trunk muscle
27 chr4:10173800-10174400 Enhancers Psoas Muscle Psoas
28 chr4:10173800-10174600 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr4:10173800-10174800 Enhancers Sigmoid Colon Sigmoid Colon
30 chr4:10173800-10175000 Weak transcription Stomach Mucosa stomach
31 chr4:10173800-10176000 Enhancers Fetal Lung lung
32 chr4:10173800-10176600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr4:10173800-10177200 Enhancers Fetal Muscle Leg muscle
34 chr4:10173800-10178000 Enhancers Placenta Placenta
35 chr4:10174000-10174200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr4:10174000-10174200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr4:10174000-10174200 Enhancers Aorta Aorta
38 chr4:10174000-10174400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
39 chr4:10174000-10174400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr4:10174000-10174800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr4:10174000-10175200 Enhancers Skeletal Muscle Male skeletal muscle
42 chr4:10174000-10176000 Enhancers Muscle Satellite Cultured Cells --
43 chr4:10174000-10176200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
44 chr4:10174000-10176200 Enhancers Right Atrium heart
45 chr4:10174000-10176400 Enhancers Lung lung
46 chr4:10174000-10177000 Enhancers Rectal Smooth Muscle rectum
47 chr4:10174000-10177200 Enhancers Gastric stomach
48 chr4:10174000-10177200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr4:10174000-10177400 Enhancers Fetal Thymus thymus
50 chr4:10174000-10177600 Enhancers Adipose Nuclei Adipose

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