Variant report

Variant rs535648
Chromosome Location chr15:50649361-50649362
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50644400-50649400 Active TSS NHLF lung
2 chr15:50644600-50649800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:50645000-50649600 Active TSS Psoas Muscle Psoas
4 chr15:50645400-50649400 Active TSS ES-WA7 Cell Line embryonic stem cell
5 chr15:50645600-50649600 Active TSS H9 Cell Line embryonic stem cell
6 chr15:50647000-50649400 Active TSS Primary T helper cells PMA-I stimulated --
7 chr15:50647800-50649400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr15:50647800-50649600 Flanking Active TSS Primary B cells from cord blood blood
9 chr15:50647800-50649600 Flanking Active TSS Primary hematopoietic stem cells blood
10 chr15:50647800-50649600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
11 chr15:50647800-50649600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr15:50647800-50649800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr15:50648000-50667600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr15:50648200-50649400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr15:50648200-50649400 Flanking Active TSS Duodenum Mucosa Duodenum
16 chr15:50648200-50649600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
17 chr15:50648200-50650000 Flanking Active TSS Primary T cells from cord blood blood
18 chr15:50648200-50653800 Weak transcription Pancreas Pancrea
19 chr15:50648200-50657200 Weak transcription Esophagus oesophagus
20 chr15:50648200-50658000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr15:50648200-50664400 Weak transcription Lung lung
22 chr15:50648400-50649400 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr15:50648400-50649400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
24 chr15:50648400-50649400 Enhancers Rectal Mucosa Donor 31 rectum
25 chr15:50648400-50649600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr15:50648400-50649600 Enhancers Primary monocytes fromperipheralblood blood
27 chr15:50648400-50649600 Weak transcription Left Ventricle heart
28 chr15:50648400-50649600 Enhancers Placenta Amnion Placenta Amnion
29 chr15:50648400-50649600 Enhancers Stomach Mucosa stomach
30 chr15:50648400-50649600 Transcr. at gene 5' and 3' K562 blood
31 chr15:50648400-50650000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr15:50648400-50651200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr15:50648400-50652800 Weak transcription Ovary ovary
34 chr15:50648400-50660400 Weak transcription Aorta Aorta
35 chr15:50648600-50649400 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr15:50648600-50649400 Enhancers Primary B cells from peripheral blood blood
37 chr15:50648600-50649400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr15:50648600-50649400 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr15:50648600-50649400 Transcr. at gene 5' and 3' Hela-S3 cervix
40 chr15:50648600-50649400 Transcr. at gene 5' and 3' HMEC breast
41 chr15:50648600-50649400 Transcr. at gene 5' and 3' NHEK skin
42 chr15:50648600-50649600 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
43 chr15:50648600-50649600 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
44 chr15:50648600-50649600 Enhancers Brain Substantia Nigra brain
45 chr15:50648600-50649600 Flanking Active TSS HUVEC blood vessel
46 chr15:50648600-50649600 Flanking Active TSS NH-A brain
47 chr15:50648600-50649800 Enhancers Small Intestine intestine
48 chr15:50648600-50650000 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
49 chr15:50648600-50650000 Enhancers Sigmoid Colon Sigmoid Colon
50 chr15:50648600-50650000 Transcr. at gene 5' and 3' A549 lung

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