The 2.0 version of rSNPBase

Variant report

Variant rs28715646
Chromosome Location chr15:50641758-50641759
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50600800-50643000 Weak transcription Fetal Thymus thymus
2 chr15:50600800-50643400 Weak transcription Fetal Muscle Leg muscle
3 chr15:50600800-50644200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr15:50600800-50644600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr15:50601400-50642800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr15:50608800-50642800 Weak transcription Hela-S3 cervix
7 chr15:50615200-50644000 Weak transcription HSMMtube muscle
8 chr15:50618200-50642400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr15:50618400-50646000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr15:50620400-50641800 Weak transcription Adipose Nuclei Adipose
11 chr15:50621200-50646000 Weak transcription Gastric stomach
12 chr15:50622000-50642400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr15:50623400-50643000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr15:50623800-50644200 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr15:50623800-50645600 Weak transcription H9 Cell Line embryonic stem cell
16 chr15:50624000-50644000 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr15:50624000-50644000 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr15:50624000-50644000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr15:50627600-50642400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr15:50627600-50643000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr15:50627800-50643600 Weak transcription Lung lung
22 chr15:50628400-50643600 Weak transcription Fetal Muscle Trunk muscle
23 chr15:50629000-50642800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr15:50630000-50643600 Weak transcription Placenta Placenta
25 chr15:50631000-50643400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr15:50631400-50643400 Weak transcription Fetal Stomach stomach
27 chr15:50631400-50643800 Weak transcription Fetal Intestine Small intestine
28 chr15:50631600-50642400 Weak transcription Thymus Thymus
29 chr15:50633800-50645600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr15:50634400-50642200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr15:50634400-50642200 Weak transcription Small Intestine intestine
32 chr15:50635800-50643600 Weak transcription Psoas Muscle Psoas
33 chr15:50636400-50642400 Weak transcription Fetal Lung lung
34 chr15:50636800-50642200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr15:50638600-50642800 Weak transcription Stomach Mucosa stomach
36 chr15:50638800-50644000 Weak transcription HMEC breast
37 chr15:50638800-50644600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr15:50639000-50642600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr15:50639200-50642200 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr15:50639200-50644000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr15:50639400-50642200 Enhancers Primary T helper cells fromperipheralblood blood
42 chr15:50639400-50643400 Weak transcription Left Ventricle heart
43 chr15:50639600-50642200 Enhancers Primary T helper naive cells fromperipheralblood blood
44 chr15:50639800-50642400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
45 chr15:50639800-50643000 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr15:50640000-50642800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr15:50640600-50644000 Enhancers Primary T killer naive cells fromperipheralblood blood
48 chr15:50640800-50641800 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr15:50640800-50642000 Enhancers Primary B cells from cord blood blood
50 chr15:50640800-50642000 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015