The 2.0 version of rSNPBase

Variant report

Variant rs8042053
Chromosome Location chr15:50591951-50591952
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50567600-50593000 Weak transcription NHDF-Ad bronchial
2 chr15:50568000-50593400 Weak transcription Rectal Smooth Muscle rectum
3 chr15:50568200-50592000 Weak transcription NHLF lung
4 chr15:50568800-50592200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr15:50568800-50599200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr15:50569200-50592200 Weak transcription H1 Cell Line embryonic stem cell
7 chr15:50570400-50606600 Weak transcription Brain Cingulate Gyrus brain
8 chr15:50570800-50600600 Weak transcription Spleen Spleen
9 chr15:50571000-50592000 Weak transcription Right Ventricle heart
10 chr15:50571200-50593000 Weak transcription Fetal Kidney kidney
11 chr15:50572800-50593200 Weak transcription Muscle Satellite Cultured Cells --
12 chr15:50573000-50592000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr15:50574400-50602000 Weak transcription Small Intestine intestine
14 chr15:50574800-50592000 Weak transcription Colon Smooth Muscle Colon
15 chr15:50575200-50601000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr15:50576000-50592000 Weak transcription Brain Anterior Caudate brain
17 chr15:50576600-50599000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr15:50578200-50592000 Weak transcription NH-A brain
19 chr15:50578200-50600400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr15:50578400-50597800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr15:50578600-50592000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr15:50578600-50592600 Weak transcription Brain Angular Gyrus brain
23 chr15:50579200-50592000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr15:50579200-50593400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr15:50580400-50599200 Weak transcription Fetal Brain Male brain
26 chr15:50580400-50605000 Weak transcription Fetal Heart heart
27 chr15:50580600-50596000 Weak transcription Fetal Brain Female brain
28 chr15:50580800-50592000 Weak transcription Brain Germinal Matrix brain
29 chr15:50580800-50600600 Weak transcription Pancreas Pancrea
30 chr15:50580800-50638400 Weak transcription NHEK skin
31 chr15:50581000-50600600 Weak transcription Colonic Mucosa Colon
32 chr15:50581200-50592000 Weak transcription HepG2 liver
33 chr15:50581200-50594600 Weak transcription Aorta Aorta
34 chr15:50581800-50592800 Weak transcription Brain Substantia Nigra brain
35 chr15:50582200-50597800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr15:50585600-50599200 Weak transcription K562 blood
37 chr15:50585800-50592200 Weak transcription GM12878-XiMat blood
38 chr15:50586600-50599000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr15:50586800-50596400 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr15:50586800-50598600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr15:50586800-50598800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr15:50586800-50598800 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr15:50587000-50594400 Strong transcription Liver Liver
44 chr15:50587000-50594800 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr15:50587000-50596600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr15:50587000-50596600 Strong transcription Fetal Thymus thymus
47 chr15:50587000-50599400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr15:50587200-50597800 Strong transcription Primary hematopoietic stem cells blood
49 chr15:50587200-50598400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr15:50587200-50600400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015