The 2.0 version of rSNPBase

Variant report

Variant rs11630045
Chromosome Location chr15:50608279-50608280
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50580800-50638400 Weak transcription NHEK skin
2 chr15:50594000-50608400 Weak transcription Duodenum Mucosa Duodenum
3 chr15:50594000-50610200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr15:50594200-50608400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr15:50594600-50610400 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr15:50596400-50623400 Weak transcription Aorta Aorta
7 chr15:50596800-50611400 Weak transcription Right Atrium heart
8 chr15:50597000-50628600 Weak transcription Fetal Stomach stomach
9 chr15:50600600-50610400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr15:50600600-50610400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr15:50600800-50610200 Weak transcription Primary T cells from cord blood blood
12 chr15:50600800-50610200 Weak transcription Pancreas Pancrea
13 chr15:50600800-50610400 Weak transcription Primary hematopoietic stem cells blood
14 chr15:50600800-50610600 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr15:50600800-50610800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr15:50600800-50610800 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr15:50600800-50612800 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr15:50600800-50613600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr15:50600800-50617200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr15:50600800-50618600 Weak transcription Fetal Intestine Large intestine
21 chr15:50600800-50623200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr15:50600800-50629400 Weak transcription Placenta Placenta
23 chr15:50600800-50631200 Weak transcription Left Ventricle heart
24 chr15:50600800-50635400 Weak transcription HepG2 liver
25 chr15:50600800-50641400 Weak transcription HSMM muscle
26 chr15:50600800-50641600 Weak transcription Fetal Kidney kidney
27 chr15:50600800-50643000 Weak transcription Fetal Thymus thymus
28 chr15:50600800-50643400 Weak transcription Fetal Muscle Leg muscle
29 chr15:50600800-50644200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr15:50600800-50644600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr15:50601000-50610200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr15:50601000-50610400 Weak transcription Primary B cells from cord blood blood
33 chr15:50601000-50610400 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr15:50601000-50610800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr15:50601000-50614400 Weak transcription Psoas Muscle Psoas
36 chr15:50601000-50622800 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr15:50601000-50627200 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr15:50601000-50630400 Weak transcription Primary B cells from peripheral blood blood
39 chr15:50601000-50637000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr15:50601000-50638400 Weak transcription HUVEC blood vessel
41 chr15:50601400-50642800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr15:50601600-50610400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr15:50601600-50610800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr15:50602200-50610800 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr15:50602200-50621000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr15:50602200-50625600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr15:50605800-50610800 Weak transcription GM12878-XiMat blood
48 chr15:50607800-50608400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr15:50608000-50608400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr15:50608000-50608600 Enhancers Liver Liver

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Last update: Aug 31, 2015