The 2.0 version of rSNPBase

Variant report

Variant rs544199
Chromosome Location chr11:86399411-86399412
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86384800-86400400 Weak transcription Gastric stomach
2 chr11:86385200-86411400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr11:86386600-86431000 Weak transcription Primary hematopoietic stem cells blood
4 chr11:86388000-86409600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr11:86389800-86399600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr11:86390000-86403600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:86390200-86399800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:86390400-86399800 Weak transcription Fetal Kidney kidney
9 chr11:86392200-86399600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr11:86393000-86406800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr11:86393600-86399600 Weak transcription Rectal Smooth Muscle rectum
12 chr11:86393600-86399800 Weak transcription Aorta Aorta
13 chr11:86393800-86399800 Weak transcription Right Ventricle heart
14 chr11:86393800-86400400 Weak transcription Pancreas Pancrea
15 chr11:86397600-86400600 Enhancers Psoas Muscle Psoas
16 chr11:86397800-86400200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr11:86397800-86400200 Enhancers Skeletal Muscle Male skeletal muscle
18 chr11:86397800-86400600 Enhancers HSMMtube muscle
19 chr11:86397800-86400600 Enhancers NHDF-Ad bronchial
20 chr11:86397800-86400800 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr11:86397800-86400800 Enhancers Placenta Amnion Placenta Amnion
22 chr11:86398000-86400000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:86398000-86400000 Enhancers Colon Smooth Muscle Colon
24 chr11:86398000-86400200 Enhancers Muscle Satellite Cultured Cells --
25 chr11:86398000-86400600 Enhancers NHLF lung
26 chr11:86398200-86399800 Enhancers HUVEC blood vessel
27 chr11:86398400-86400200 Enhancers A549 lung
28 chr11:86398400-86400400 Enhancers GM12878-XiMat blood
29 chr11:86398400-86400600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr11:86398600-86399600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:86398600-86400000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr11:86398600-86400200 Enhancers Osteobl bone
33 chr11:86398800-86399600 Weak transcription HSMM muscle
34 chr11:86398800-86405400 Weak transcription Hela-S3 cervix
35 chr11:86399000-86400200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr11:86399200-86400600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr11:86399200-86400600 Enhancers Stomach Smooth Muscle stomach
38 chr11:86399200-86400600 Enhancers NH-A brain
39 chr11:86399400-86399600 Enhancers Fetal Heart heart
40 chr11:86399400-86399800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr11:86399400-86399800 Enhancers Right Atrium heart
42 chr11:86399400-86400000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr11:86399400-86400400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:86399400-86400600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr11:86399400-86400600 Enhancers Left Ventricle heart
46 chr11:86399400-86400600 Enhancers Ovary ovary
47 chr11:86399400-86400600 Enhancers Skeletal Muscle Female skeletal muscle
48 chr11:86399400-86400600 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015