The 2.0 version of rSNPBase

Variant report

Variant rs547093
Chromosome Location chr11:59572604-59572605
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59524600-59573800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:59541000-59573600 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr11:59544400-59573200 Weak transcription Psoas Muscle Psoas
4 chr11:59551400-59572800 Weak transcription Dnd41 blood
5 chr11:59551600-59573600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr11:59551600-59576600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr11:59551600-59577200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr11:59552000-59573000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr11:59554800-59576400 Strong transcription Primary monocytes fromperipheralblood blood
10 chr11:59554800-59576400 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr11:59555000-59573800 Weak transcription Small Intestine intestine
12 chr11:59555000-59576800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr11:59555600-59576600 Strong transcription Placenta Placenta
14 chr11:59555800-59573600 Weak transcription HSMM muscle
15 chr11:59556000-59577000 Weak transcription Fetal Heart heart
16 chr11:59561000-59573600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr11:59561000-59573800 Weak transcription Placenta Amnion Placenta Amnion
18 chr11:59561600-59573000 Weak transcription Brain Germinal Matrix brain
19 chr11:59561800-59573000 Weak transcription Fetal Muscle Trunk muscle
20 chr11:59563400-59573800 Weak transcription HSMMtube muscle
21 chr11:59563600-59573000 Weak transcription Esophagus oesophagus
22 chr11:59563600-59573600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr11:59563800-59573000 Weak transcription HepG2 liver
24 chr11:59563800-59573800 Weak transcription Gastric stomach
25 chr11:59564200-59573000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr11:59565200-59573000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr11:59565400-59573200 Weak transcription Right Ventricle heart
28 chr11:59565400-59573600 Weak transcription Pancreas Pancrea
29 chr11:59565600-59573200 Weak transcription NHDF-Ad bronchial
30 chr11:59566600-59573800 Weak transcription Ovary ovary
31 chr11:59567000-59576400 Strong transcription Primary B cells from cord blood blood
32 chr11:59567200-59576600 Strong transcription iPS-20b Cell Line embryonic stem cell
33 chr11:59567800-59574800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr11:59568400-59573800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr11:59568600-59573600 Weak transcription Aorta Aorta
36 chr11:59568600-59573800 Weak transcription Colonic Mucosa Colon
37 chr11:59568800-59577000 Weak transcription Fetal Brain Male brain
38 chr11:59569000-59572800 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr11:59569200-59573200 Weak transcription Stomach Smooth Muscle stomach
40 chr11:59569800-59573000 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr11:59569800-59573800 Weak transcription Fetal Lung lung
42 chr11:59569800-59576000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr11:59570000-59573000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:59570000-59573000 Weak transcription A549 lung
45 chr11:59570000-59573400 Weak transcription HMEC breast
46 chr11:59570000-59573600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr11:59570000-59573800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr11:59570000-59574800 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr11:59570000-59576400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr11:59570000-59576600 Strong transcription H1 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015